KEGG   Canis lupus familiaris (dog): 476462
Entry
476462            CDS       T01007                                 
Symbol
SUPT5H
Name
(RefSeq) transcription elongation factor SPT5 isoform X1
  KO
K15172  transcription elongation factor SPT5
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    476462 (SUPT5H)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cfa03021]
    476462 (SUPT5H)
   03019 Messenger RNA biogenesis [BR:cfa03019]
    476462 (SUPT5H)
Transcription machinery [BR:cfa03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     476462 (SUPT5H)
  RNA polymerase I system
     476462 (SUPT5H)
Messenger RNA biogenesis [BR:cfa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     476462 (SUPT5H)
SSDB
Motif
Pfam: KOW Spt5-NGN Spt5_N DUF3912 DUF150_C Ribonuc_P_40
Other DBs
NCBI-GeneID: 476462
NCBI-ProteinID: XP_005616644
Ensembl: ENSCAFG00000005469
VGNC: 46992
UniProt: A0A8C0SID0 A0A8I3MSR1
Position
1:complement(113163184..113192230)
AA seq 1087 aa
MSDSEDSNFSEEEDSEHSSDGEEAEVEEERRSVAGSEKEEEPEEEEEEEEEEEYDEEEEE
EDDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRS
GARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLW
TVKCKIGEERATAISLMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIE
GVGNLRLGYWNQQMVPIKEMTDVLKVVKEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQ
NTISLKMIPRIDYDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLI
FEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNF
QPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKV
IAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELV
QLDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIV
KVIDGPHSGREGEIRHLFRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVG
GFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGY
IGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGS
GSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAF
DDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQG
SYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSP
GGYNPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSVYLKDSE
KVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRF
LGKLLEA
NT seq 3264 nt   +upstreamnt  +downstreamnt
atgtcggacagcgaggacagcaacttctccgaggaggaggatagtgagcacagcagtgac
ggcgaggaggccgaggtagaggaagagcggcggagtgtagcaggcagtgagaaggaggaa
gagccggaggaggaagaggaggaggaagaggaggaagaatatgatgaggaagaggaagaa
gaagatgatgaccggcctcccaagaaaccccgccatggcggcttcattctggacgaggcc
gatgtggatgatgagtatgaggatgaggaccagtgggaggacggagcagaggacattcta
gagaaagaagagattgaagcttccaatatcgataatgttgtcttggatgaagaccgttct
ggggctcgccgcctacaaaacctctggagggaccagcgagaggaagaactgggcgagtat
tacatgaagaaatatgccaagtcgtctgtgggagagacggtatatggaggatccgatgag
ctctcagatgacatcacccagcagcagctgctcccaggagtcaaggatccaaatctgtgg
actgtcaaatgtaagattggggaggaaagggccacagccatttccttgatgcgcaagttc
attgcctaccagttcacagacacgcccctgcagattaagtcagtggtggcaccagagcac
gtgaagggttatatctacgtggaggcctataagcagacacatgtgaagcaggccattgaa
ggtgtaggcaacctgcggcttggctactggaaccagcagatggtgcccatcaaggagatg
acagatgttctcaaagtcgtgaaggaggtggccaacctgaagccaaaatcctgggtccgc
ctgaagaggggcatctataaggacgacatcgcccaggtggattatgtggaacccagccaa
aacacgatctccttgaagatgatcccccgcattgattacgaccgcatcaaggcccgcatg
agcttgaaagactggtttgctaaaaggaagaagtttaagcggcctccccagaggctgttt
gacgccgagaagatcaggtccctgggtggtgatgttgcctctgatggtgacttcctcatc
ttcgaggggaaccgttacagccggaagggttttctcttcaagagctttgctatgtctgct
gtgatcacagagggtgtgaagccaacgctctccgagctggagaagtttgaggaccagcca
gagggcattgaccttgaggtggtgaccgagagcacagggaaggagcgggaacacaacttc
caacctggggacaatgtggaggtgtgtgagggtgagctcatcaacctgcagggcaagatc
ctcagcgtggatggcaacaagatcaccatcatgcccaagcacgaggacctcaaggacatg
ctggagttcccggcccaggagctccggaagtactttaaaatgggggaccacgtgaaggtg
attgctggtcgatttgagggtgacacaggcctcattgtgcgagtggaggagaactttgtt
atcctcttctctgacctcaccatgcacgagctgaaggtgctcccccgggacctgcagctc
tgctcagagacggcgtcgggtgtggatgtggggggccagcatgagtggggggagctggtg
cagctggacccccagaccgtgggtgtcatcgtgcgactggagcgagagaccttccaggtg
ctgaacatgtatgggaaggtggtgactgtcagacaccaggctgtgacacgaaagaaggac
aaccgctttgctgtggccctggactcagaacagaataacatccatgtgaaagacatcgtc
aaggtcattgatggcccccactcaggccgggagggcgaaattcgccatctcttccgcagc
tttgcctttctgcactgcaagaaactggtggagaacggggggatgtttgtctgcaagacc
cgccacctcgtcctggcagggggctccaagccccgagatgtgaccaacttcacagtgggt
ggttttgcccctatgagcccccggatcagcagccccatgcaccccagcgctggaggtcag
cgtggtggctttggcagccctggtggcggcagcggaggcatgagcaggggtcggggacgg
agagacaacgaactcataggccaaactgtgcgcatctcccaaggaccctacaaaggctac
attggtgtggtgaaggatgccactgagtccacagcccgcgtggagctgcactctacctgc
cagaccatctctgtggaccgtcagcggctcactacagtgggttcacggcgcccaggtggc
atgacctcaacctatggacggacgcccatgtatggctcccagacgcccatgtatggctct
ggctcccgcacacccatgtatggctcccagactcctctccaggatggcagccgcacccca
cattacggttcacagacacccctgcatgatggcagccgcactcctgctcagagtggggcc
tgggaccccaataaccctaacacaccgtcgcgggctgaggaagaatacgagtatgccttc
gacgacgagcccaccccatccccacaggcctatgggggcacccccaatccccaaacacct
ggctatcctgacccctcatccccacaggtcaacccacagtacaacccacagacaccaggg
acgccagccatgtacaacacagaccagttctccccctatgccgccccctccccacaaggc
tcctaccagcccagccccagcccccagagttaccaccaggtggcgccaagcccagcaggc
taccagaacacccactctccagccagctaccaccccacaccctcacccatggcctatcag
gccagccccagcccgagccctgttggctacagtccgatgacacccggagccccctcccct
ggtggctacaacccccacacaccaggctcaggcattgagcagaactccagcgactgggta
accactgacatccaggtgaaggtgcgggacacctacctggatacacaggtggtggggcag
acaggcgtcatccgcagcgtcacaggaggcatgtgctctgtatacctaaaggacagtgag
aaggttgtcagcatctccagtgagcacctggagcccatcacccccaccaagaacaacaag
gtgaaggtgatcctgggtgaggatcgggaagccacaggggtcctgttgagcatcgatggt
gaggatggcatcgtccgcatggaccttgacgagcagctcaagatcctcaacctccgcttc
ctggggaagctcctggaggcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (23)   
   UniProt (2)   
   RefSeq(pep) (21)   
DNA sequence (21)   
   RefSeq(nuc) (21)   
Protein domain (6)   
   Pfam (6)   
All databases (77)   

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