KEGG   Canis lupus familiaris (dog): 477088
Entry
477088            CDS       T01007                                 
Symbol
COPB2
Name
(RefSeq) coatomer subunit beta' isoform X1
  KO
K17302  coatomer subunit beta'
Organism
cfa  Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cfa04131]
    477088 (COPB2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cfa04147]
    477088 (COPB2)
Membrane trafficking [BR:cfa04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    477088 (COPB2)
Exosome [BR:cfa04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   477088 (COPB2)
SSDB
Motif
Pfam: Coatomer_WDAD WD40 NBCH_WD40 Helicase_dom4_arc WD40_2
Other DBs
NCBI-GeneID: 477088
NCBI-ProteinID: XP_005634562
Ensembl: ENSCAFG00000007602
VGNC: 39505
UniProt: A0A8C0QHX9 A0A8I3S666
Position
23:complement(35524048..35592583)
AA seq 906 aa
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG
REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWDNTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILKYLSEKVLAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNASMVNKLAEGAE
RDGKNNVAFMSYFLQGKLDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKV
NQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHADLWPAKQYPLVTPNEERNVMEEAK
GFQPSRSAAQQELDGKPASPTPVIVTSHTANKEEKSLVELEVDLDNLELEDIDTTDINLD
EDILDD
NT seq 2721 nt   +upstreamnt  +downstreamnt
atgcctctgcgacttgatataaagagaaagttaactgctcgatcggatcgagttaagagt
gtggatttgcatcctacagagccatggatgttggcaagtctttacaatggcagtgtgtgc
gtttggaatcatgaaacacagacattggtgaaaacatttgaagtgtgtgatcttcctgtt
cgagctgcaaagtttgttgcaagaaagaattgggttgtgacaggagcggatgacatgcag
attagagtgttcaattacaatactttggagagagttcatatgtttgaagcacactcagac
tatattcgttgtattgctgttcatccaacccagcctttcattctgactagcagcgatgac
atgcttattaagctctgggactgggataaaaaatggtcctgctcacaagtgtttgaagga
cacactcattatgtcatgcagattgtgatcaatcccaaagataacaatcagtttgccagt
gcatctttggacaggaccatcaaggtttggcaattgggttcttcctcaccaaacttcact
ctggaaggacatgagaaaggcgtgaattgcatcgattactacagtggtggtgataaacca
tacctcatttcaggtgcagatgaccgtcttgttaaaatatgggactatcagaataagaca
tgtgtacagacactggagggacatgctcaaaatgtgtcttgtgccagttttcatcctgag
ttgccaatcatcatcacaggttcagaagacggaaccgtgcgtatttggcattccagcacg
taccgccttgagagcacattgaattatggaatggagagggtgtggtgtgtggccagtctg
agagggtccaacaatgttgctttgggctatgatgaagggagcatcattgtgaagcttggt
cgggaggaacctgccatgtccatggatgccaatggaaagataatttgggccaagcattca
gaagtccagcaggccaacctaaaagcaatgggagatgctgaaattaaagatggagaaaga
ctgccattagcagtcaaggacatgggcagttgtgaaatatatccccagactattcagcac
aatcctaatggacggtttgttgtggtgtgtggcgatggtgagtatattatctacacagca
atggcgttgagaaacaagagctttggatctgcccaggagtttgcatgggcccatgattct
tcagaatatgcaataagagagagcaacagtgttgtaaagatatttaagaactttaaggaa
aaaaaatcatttaaaccagattttggagctgaaagtatctatggaggcttcttattggga
gtcagatctgtaaatggcttagctttctatgactgggacaatacagaactcatacgcaga
attgaaattcagcccaaacacattttctggtctgactctggagagctggtctgtattgcc
accgaggagtcattttttatcttgaagtatctgtctgaaaaagtcttggctgcacaggaa
acacatgagggagttactgaagatggcattgaagacgcctttgaggttcttggtgagatt
caggaaattgtgaaaacagggctgtgggtaggcgattgcttcatttacacaagttctgtg
aacagattaaattattatgttggaggagaaatagtcaccattgcccacttggacaggaca
atgtatctcctgggctatattcctaaagacaacaggctttatctgggtgataaagaactg
aacattgttagctattctctgctggtttccgtgctggaataccagacagctgtcatgaga
agggactttagcatggctgataaggttcttcctaccattccaaaagaacagaggaccaga
gttgcacactttctggaaaagcaaggcttcaagcagcaagctcttacagtatccacagat
ccggagcatcgctttgaacttgctctacagcttggagaactgaaaatcgcataccaatta
gcagtagaagcagagtcagaacaaaagtggaaacaacttgccgaacttgccattagtaaa
tgtcagtttggccttgcccaggagtgcctgcaccatgcacaggattatggaggcctgttg
ctcttggccactgcctctggaaatgctagtatggtgaacaaactagcagagggtgcagag
agagatggcaagaataacgtggcattcatgagctactttttacagggcaagctagatgcc
tgcctggaactcttgattagaacaggtcgattgcctgaagccgccttcctagcccggact
tacttacccagtcaggtttcaagggtggtgaaactctggagagaaaatctttcaaaagtc
aatcagaaagcagcagaatcccttgcagatccaacagaatatgaaaacctttttcctgga
ttaaaagaagcctttgttgtagaagaatgggtgaaggaaacacatgctgatctgtggcca
gccaagcagtacccacttgtcacgccaaatgaagaaagaaatgttatggaagaggcaaaa
ggctttcagccctcaagatctgcagctcaacaggaacttgatgggaaacctgcttctcct
actccagtaattgtcacctcccacacagccaacaaagaagaaaagagtttagtcgaactg
gaagtagatctggataatttagaattagaagatattgacacaacagacatcaacctggat
gaagatattttggatgattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (12)   
   UniProt (2)   
   RefSeq(pep) (10)   
DNA sequence (10)   
   RefSeq(nuc) (10)   
Protein domain (5)   
   Pfam (5)   
All databases (46)   

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