KEGG   Canis lupus familiaris (dog): 478538
Entry
478538            CDS       T01007                                 
Symbol
CMSS1
Name
(RefSeq) collagen alpha-1(VIII) chain isoform X1
  KO
K23455  collagen type VIII alpha
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    478538 (CMSS1)
SSDB
Motif
Pfam: Collagen C1q BclA_C
Other DBs
NCBI-GeneID: 478538
NCBI-ProteinID: XP_005639439
Ensembl: ENSCAFG00000009230
VGNC: 59067
UniProt: A0A8C0P1A4 A0A8I3NST7
Position
33:6442013..6973961
AA seq 744 aa
MAAPPGPLQLLGVLLTISLGSVRLIQAGAYYGIKPLPPQIPPQIPPQIPQYQPLGQQVPH
MPLGKDGLSMGKELPHVQYGKEYPHLPQYMKEIQPVPRMGKEAAPKKGKEIPLASLRGEQ
GPRGEPGPRGPPGPPGLPGHGIPGTKGKPGPQGYPGIGKPGMPGMPGKPGAMGMPGAKGD
IGPKGEIGPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGAKGERGPKGPPGPPGLQGPK
GEKGFGMPGLPGLKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGPPGEPGPQGP
VGVPGVQGPPGMPGVGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPKG
DKGIGGLPGALGPRGEKGPVGAPGMGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVG
PQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGHKGLPGVPGAPGLLG
PKGEPGIPGDQGLQGPPGIPGIAGPSGPIGPPGMPGPKGEPGIPGPPGFPGVGKPGVAGL
HGPPGKPGALGPQGQPGLPGPPGPPGPPGAPAVMPPTPPPHGEYLPDMGLGIDGVKPPHA
YGAKKGKNGGPAYEMPAFTAELTAPFPPVGAPVKFDKLLYNGRQNYNPQTGIFTCEVPGV
YYFAYHVHCKGGNVWVALFKNNEPMMYTYDEYKKGFLDQASGSAVLLLRPGDRVFLQLPS
EQAAGLYAGQYVHSSFSGYLLYPM
NT seq 2235 nt   +upstreamnt  +downstreamnt
atggctgcgccgcccggccctctgcagctgctgggagtgctgcttaccatttccctgggc
tccgtcaggctcattcaggctggtgcttactatgggatcaagccactgccaccacaaatt
cctcctcagatcccaccgcaaattccacaataccagcctctgggccagcaagtacctcac
atgcctttgggcaaagacggccttagcatgggcaaggagctgccccacgtgcagtatggc
aaagagtatccacatctgccccaatacatgaaggaaattcagccggtgccaagaatgggc
aaggaagcggcacctaagaaaggcaaagaaataccattagccagtttacgaggggagcaa
ggcccccgtggagagcccggcccaagaggacccccggggccccccggcttaccaggtcat
gggatacctggaaccaaaggaaaaccagggccacagggatacccaggaattggaaaacca
ggtatgcctgggatgccaggaaagccaggagccatgggaatgccaggggcaaaaggtgac
attggacccaaaggggagatcgggcctatggggatcccagggccgcaaggacctccaggg
cctcacggacttcctggcattggaaaaccaggtgggccagggctaccggggcagccaggt
gcaaagggagagcgaggacccaaaggtcccccgggacctccaggccttcagggtccgaaa
ggagagaagggcttcgggatgccaggtctgccaggcctaaagggtcctccagggatgcat
ggcccccctggccctgttggacttcccggggtgggtaaaccaggagtgacaggcttccct
gggccccaaggccccctgggaaagccaggtcctccaggggaacctgggccccaaggccct
gttggggtcccaggagttcaagggcctcctgggatgcctggagttggaaagccaggccag
gatgggatccctggccagccaggatttccaggtggcaaaggggagcaaggactgccaggg
ctgccaggacctccaggccttccagggattgggaaaccgggcttcccaggacccaagggt
gacaagggcatagggggtcttcctggggctctaggaccaagaggggagaaaggaccagtc
ggtgcccctggaatggggggccccccaggagagccaggcctgcctgggatcccaggtcct
atgggtcctccaggtgctattggttttcccggacccaagggagaaggtggcattgtaggg
ccacaggggccaccaggtcccaagggtgagccagggcttcaaggcttcccaggaaagcca
ggtttccttggtgaagtagggccccctggcatgaggggcttgccaggtcccatagggccc
aagggggaagctgggcacaaagggttaccaggggtccctggggctccagggttgcttgga
ccaaagggagaaccaggaatcccaggggatcagggtctacagggccctccaggcatccca
gggatcgcaggccccagtgggcccattggaccacctggaatgccaggcccaaaaggggaa
ccaggcatcccagggccccctgggttccctggagtagggaagcctggagtagcaggactt
catgggcccccagggaagcctggtgcccttggtcctcaaggccagccgggccttccaggg
cccccaggccctccagggcccccaggggccccagctgtgatgcccccgacaccaccaccc
catggagagtatctgccagatatggggctgggaatcgatggagtgaaacccccccatgcc
tatggggctaagaaaggcaagaacggagggccagcctacgagatgcctgccttcacagct
gagctgactgcgcctttcccacctgtgggggccccagtgaagtttgacaaactgctctat
aacggcagacagaactacaacccacaaacgggcatcttcacctgcgaggtccctggggtc
tactactttgcataccatgttcactgcaaggggggcaatgtgtgggttgctctgttcaag
aacaacgagcccatgatgtacacgtacgatgagtacaaaaagggctttctggaccaggca
tctgggagtgcggtgctgctgctcaggcccggagaccgagtgttcctccaactgccctca
gaacaggctgcaggactgtatgcggggcagtacgtccattcctccttttcaggatattta
ttatatcccatgtaa

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (38)   
   UniProt (2)   
   RefSeq(pep) (36)   
DNA sequence (36)   
   RefSeq(nuc) (36)   
Protein domain (3)   
   Pfam (3)   
All databases (88)   

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