KEGG   Canis lupus familiaris (dog): 479706
Entry
479706            CDS       T01007                                 
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X3
  KO
K21917  BTB/POZ domain-containing protein KCTD7/14
Organism
cfa  Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cfa04121]
    479706 (RABGEF1)
Ubiquitin system [BR:cfa04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul3 complex
    Adoptor and target recognizing subunit (BTB)
     479706 (RABGEF1)
SSDB
Motif
Pfam: VPS9 DUF5601 SSTK-IP
Other DBs
NCBI-GeneID: 479706
NCBI-ProteinID: XP_013969621
Ensembl: ENSCAFG00000010773
VGNC: 54062
UniProt: A0A8C0RZ38 A0A8I3MFI3
Position
6:2815410..2859509
AA seq 299 aa
MQTRGKVPPERVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQKRIRALHWVTPQM
LCVPVNEEISEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFNAIKITKNEPASA
DDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQ
SLNLSQEDFDRYMSGQTSPRKQESENWSPDACLGVKQMYKNLDLLSQLNERQERIMSEAK
KLEKDLIEWTDGIAKEVQDIVEKYPLEIKPPNQSLAAIDSENVENDKLPPPLQPQVYAG
NT seq 900 nt   +upstreamnt  +downstreamnt
atgcagactcgtggaaaagtgcctccagaaagagttgaaaagataatggatcagattgaa
aagtacatcatgactcgtctctataaatatgtgttctgtccagaaactaccgatgatgag
aagaaagatctcgctattcagaagaggatcagagccctgcactgggttacacctcagatg
ctttgtgtccctgttaatgaagaaatttcagaagtatctgatatggtggtgaaagcaatc
acagatatcattgaaatggattcaaagcgtgtacctcgagataagttggcctgcatcacc
aagtgtagcaagcacatcttcaatgctattaagatcaccaagaatgagccagcctcagcc
gatgactttttaccaactctcatctacattgttttgaagggcaaccccccacgtcttcag
tccaatatccagtatatcacccgcttctgcaacccaagccgattgatgactggagaggat
ggctactatttcaccaatctgtgctgtgctgtggctttcattgagaaattagatgctcag
tctttgaatttaagtcaagaagattttgatcgatacatgtctggccagacttctcccagg
aagcaagaatctgagaattggtctcctgatgcctgcttaggggttaagcaaatgtataag
aacttggatcttctgtctcagttgaatgaacggcaagaaaggatcatgagtgaagcaaaa
aaacttgaaaaagacctaatagaatggacggatggaattgcaaaagaggtacaagacatt
gttgagaaatacccgcttgaaattaagcccccaaatcaatctttagcagctattgactct
gaaaatgttgaaaacgataaacttcctccaccattgcaacctcaagtttatgcaggatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (27)   
   UniProt (2)   
   RefSeq(pep) (25)   
DNA sequence (25)   
   RefSeq(nuc) (25)   
Protein domain (3)   
   Pfam (3)   
All databases (73)   

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