KEGG   Canis lupus familiaris (dog): 483013
Entry
483013            CDS       T01007                                 
Symbol
IFT172
Name
(RefSeq) intraflagellar transport protein 172 homolog
  KO
K19676  intraflagellar transport protein 172
Organism
cfa  Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:cfa03037]
    483013 (IFT172)
Cilium and associated proteins [BR:cfa03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex B2
   483013 (IFT172)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 Clathrin Coatomer_WDAD TPR_11
Other DBs
NCBI-GeneID: 483013
NCBI-ProteinID: XP_540128
Ensembl: ENSCAFG00000005048
VGNC: 41884
UniProt: A0A8C0RH11 A0A8I3N5M7
Position
17:complement(21281228..21318724)
AA seq 1749 aa
MQLKHLRTLLSPQDGAAKVTCMAWSHNNAKFAVCTVDRVVLLYDEHGERRDKFSTKPADM
KYGRKSYMVKGMAFSPDSTKIAIGQTDNIIYVYKIGEDWGDKKVICNKFIQTSAVTCLQW
PAEHIIVFGLAEGKVRLANTKTNKSSTIYGTDSYVVSLTTNCSGKGILSGHADGTIVRYF
FDDEGSGESQGKLVNHPCPPYALAWATNSIVAAGCDRRIVAYGKEGHVLQTFDYSRDPNE
REFTTAAASPGGQSVVLGSYDRLRVLNWSPRRSVWEEAKPKEIANLYTVTALAWKRDGSR
LCAGTLCGGVEQFDCCLRRSIYKNKFELTYVGPSQVIVKNLSSGTRVVLKSHYGYEVEEV
KILGKERYLVAHTSDTLLLGDLNTNRLSEVAWQGSGGNEKYFFENENVCMIFNAGELTLV
EYGSNDTLGSVRTEFMNPHLISVRINERRQRGMEDNKKLAYLVDIKTIAIVDLIGGYNIG
TISHDSRVDWLELNETGHKLLFRDRKLRLHLYDIESCTKTMILNFCSYVQWVPGSDVLVA
QNRNSLCVWYNIEAPERVTMSSIRGDVIGLERGGGKTEVMVTEGVTTVAYTLDEGLIEFG
TAIDDGNYTRATAFLETLEMTPETEAMWKTLSKLALEARQLHIAERCFSALGHVAKARFL
HETNEIADQVSREYGGEGTDFYQVRARLAMLEKNYKLAEMIFLEQNAVEEAMDMYQELHR
WDECIAVAQAKGHPALEKLRRGYYQWLMDTQQEERAGELQESQGDGLAAISLYLKAGLPA
KAARLVLAREELLANTELVEHITAALVKGELYERAGDLFEKIQNPQRALECYCKGNAFMK
AVELARLAFPVEVVRLEEAWGDHLVQQKQLDAAINHYIEARCSIKAIEAALGARQWKKAI
YILDLQDQNTASKYYPRVAQHYASLQEYEIAEELYIKGDQTKDAIDMYTQAGRWEQAHKL
AVKCMRPEDVSVLYITQAQEMEKQGKYREAERLYVTVEEPDLAITMFKKHKLYEDMIRLV
GKHHPDLLSDTHLHLGKELEAEGRLQEAEYHYLEAQEWKATVNMYRSSGLWEEAYRVAKA
HGEANAHKHVAYLWAKSLGGESAVRLLNKLGLLEAAIDHAADNCSFEFAFELSRLALKHK
TPEIHLRYAMYLEDEGKFEEAEAEFIRAGKPKEAVLMFFHNQDWEAAQRVAEAHDPDSVA
EVLLRQAREALEEKDFQKAEGLLLRAQRPGLALNYYKEAGLWSDALRICKDYVPGQLEAL
QEEYEREATKKGARGLEGLVEQARQWEQAGEYGRAVDCYLKVRDSSSGSLMEKCWMKAAE
LAIKFLPPQRSLEVVQAVGPQLIGIGKHSAAAELYLNLDLVKEAIDAFIEGEEWNKAKRV
AKELDPRYEDYVDQHYKEFLKNQGKVDSLVGVDVVAALDLYVEQGQWDKCIETATKQNYK
ILHKYVALYATHLIREGGYGQALALYVQHGAPANPQNFNIYKRIFTDMVSSPGTNSAEAY
HNWADLRDVLFNLCENLVKSSEVNTPAHEEFETMLLIAHYYATRSAAQSVKQLETVAARL
SVSLLRHTQLLPADKAFYEAGIAAKAVGWENMAFIFLNRFLDLTDAIEEGTLDALDHSDF
QDTDIPFEVPLPAKQHVPEAQREEVRDWVLTVSMDQRLEQVLPRDERGAYEASLVAVSTG
VRALPCLITGYPILRNKIEFKRPGKAANKDNWNKFLMAIKTSHSPVCQDVLKFISQWCGG
LPSTSFSFQ
NT seq 5250 nt   +upstreamnt  +downstreamnt
atgcagttgaagcacctgaggaccctgctgagccctcaggatggagctgcgaaggtgacc
tgcatggcttggtcccacaacaatgccaaatttgctgtctgcacagtggaccgagtggtg
ttgctatatgatgagcatggggagcggagagacaaattttccaccaaaccagctgacatg
aagtatggcaggaagagctatatggtgaaaggcatggctttttctcctgattccactaaa
attgccataggacagaccgacaacatcatctatgtgtacaagattggagaagattggggt
gacaagaaagtcatctgtaacaaattcatccagacgagtgctgtcacttgtctgcagtgg
ccagcggagcacatcattgtctttggactggctgaagggaaggttcgtttagcaaacact
aaaactaataaatcatctaccatctatgggacagattcttacgtggtatcactgacaaca
aattgctctgggaaaggaattctctctggtcatgcagatggcaccattgttagatatttc
tttgatgatgaaggctctggagagtcacaggggaagttggttaaccacccatgcccaccc
tatgccttggcttgggcaaccaacagcatcgtggctgcaggctgtgatcggaggattgtg
gcctatgggaaggaaggccatgtactacaaactttcgattacagccgtgaccctaatgag
cgggagttcaccacagccgccgcaagtcctggaggccagtctgttgtgttgggaagttat
gacagacttcgggtgctcaactggagccctcgaagaagcgtctgggaagaggcaaagccc
aaggagattgccaacttatacaccgtcactgccttggcctggaaacgggatggctcacga
ctctgtgcgggcacactctgtggtggagtggaacagtttgactgctgcctccggaggagc
atttataagaataagtttgagttgacgtatgtgggacctagccaggtgattgtgaagaac
ctgtcatcggggacccgagtggtactcaagtcacactatggttatgaagtggaagaggtg
aaaatcctgggaaaggaacgttatctggtggcccacacatcagacacactgctgctgggg
gacctgaacactaatcgcctcagtgaggttgcttggcagggatctgggggcaatgagaag
tatttctttgaaaatgaaaatgtatgtatgatcttcaatgctggagagctaactctagtg
gagtatgggagtaatgataccctgggttctgtacgtactgagttcatgaacccccacctc
atcagcgtccgcattaatgagaggcgtcagcgaggaatggaagacaataagaaattggct
tatcttgttgatattaaaactattgctatagtggatctgattggtggctacaacattggc
accatcagccacgacagccgtgtggattggctggaacttaatgaaactgggcacaagctt
ctcttcagggaccggaaacttcgtttacatctatacgatattgaaagctgcactaagaca
atgatcctcaacttctgctcctacgtgcaatgggtcccaggaagtgatgtgctggtagct
cagaaccgaaacagcttgtgtgtgtggtacaacattgaggcacctgagagggtcaccatg
tcctctattaggggcgatgtcataggtctggaacggggtggggggaagaccgaggtgatg
gtgaccgaaggtgtgactacagttgcctacacgctggatgaaggccttatcgaatttgga
acagccatcgatgatggcaactacacccgggcaacagccttcttggagactctggaaatg
acccctgaaacagaggcaatgtggaaaactttgagcaaactggcgctagaggcaaggcag
ctccacattgccgagaggtgcttttctgctttgggccatgtagcaaaagctcgattcctg
cacgagaccaatgagattgcagatcaagtgtctcgggaatatggtggagaaggaacagac
ttttaccaggtccgagcacgcctagccatgctagagaagaactacaagctggctgaaatg
atcttcttggaacagaatgctgtcgaggaggccatggacatgtaccaggagctacaccgt
tgggatgagtgtatcgcagtggctcaggccaaggggcacccggccctggagaagctgcgc
cggggttactatcagtggctgatggacacccagcaagaggagcgagcaggtgaactacag
gagagccaaggggatggactagcagccatcagcctctacctcaaagcagggctccctgcc
aaagctgctcgactggtgctggcccgggaggaactgctagccaacacagagctggtggaa
cacatcactgcagcccttgtcaagggggagctgtatgaaagggccggtgatctcttcgag
aagattcaaaatccacagcgggccctggagtgctactgtaaaggcaacgcattcatgaaa
gcggtggagctggctcggttggcattcccagtggaagtagtgagactggaagaggcatgg
ggggatcatttggtgcagcagaagcagctggatgcagccattaatcactacattgaagcc
aggtgctccattaaggcaattgaggctgccctgggtgcccgccagtggaaaaaggcaatt
tatatattagatctccaggaccagaacactgcgtccaaatactatccccgtgtggcccaa
cactatgcgtctctgcaggagtatgagattgctgaggaactctatattaagggagaccag
acaaaagatgcaatagacatgtatactcaggctggccgctgggagcaagcccacaagctg
gcagtgaagtgcatgagacccgaggatgtgtcagtgctatacatcacccaggctcaggag
atggagaagcagggcaagtaccgtgaggctgaaaggctatatgtgacagtggaagaacct
gatcttgccatcaccatgttcaaaaagcacaagttgtatgaagatatgatccgcctggta
gggaagcaccatccagatctcctcagtgacacacacctacacctgggcaaggagctggag
gctgaaggccgacttcaggaggctgagtatcactacctggaggctcaggaatggaaagca
acagtgaacatgtaccggtccagtgggctttgggaggaggcctaccgggtggccaaggct
catggagaagctaatgcccacaaacatgtggcctatctgtgggcaaaaagcctgggagga
gagtctgcagttagattgcttaataagctgggactcctggaagctgccattgaccacgct
gcggacaactgctcatttgaatttgcttttgaactctctcggctggccctcaagcacaaa
acccctgagattcatctccgatacgctatgtacctggaggatgagggtaaatttgaagag
gccgaagctgaattcatcagggctggtaaacccaaggaagcagtcctcatgtttttccac
aatcaggattgggaggcagctcagcgtgtggccgaggcccacgatcctgacagcgtcgcc
gaggtgctcttgcggcaggcccgggaggctttggaggagaaggactttcagaaagcagaa
gggctgctgcttcgggcccagaggccaggcctggccctcaattattataaggaggctgga
ttatggagtgatgctctgcggatctgcaaggactatgtaccaggccagctggaggctctg
caggaagagtatgagcgggaagctaccaagaagggggccaggggcctggaggggctggtg
gagcaagctcggcagtgggagcaggcaggggagtatggccgtgcggtggactgctatctt
aaagtgcgggactccagcagcggcagcctgatggaaaagtgctggatgaaggcggctgaa
ctcgccatcaagtttctgcctccccaacgcagtctggaagtagttcaagctgtgggaccc
cagctgattggaattggaaagcatagtgcagcagcagagctctatctgaacctggaccta
gtcaaagaggcgatcgatgctttcattgagggtgaggagtggaacaaggctaagcgtgtg
gccaaggagttagatccccggtatgaagactatgtggaccagcattataaagagttcctc
aagaaccagggcaaagtggactcgctggtgggtgtggatgtggtggctgctttggacctg
tatgtggagcagggccagtgggacaagtgcattgaaacagctaccaagcagaactacaag
attctgcacaagtacgtggctttgtatgcgactcacctgatccgagaaggtggctatggc
caggcgctggccctgtatgtgcagcatggagcccctgctaacccacagaacttcaatatc
tacaaaaggatcttcaccgacatggtgagctcacctgggaccaacagtgctgaagcctat
cacaactgggctgatcttcgggatgtgctctttaacttgtgtgagaacctggtgaagtct
agtgaggtcaacaccccagcccatgaggagtttgagacgatgcttctgattgctcattac
tatgccactcgctcagcggcccagagtgtcaaacagctggaaactgtggctgccaggctt
tctgtttcgctcttacgccacacccagctactacctgcagacaaggccttctatgaagca
ggcattgctgccaaggcagttggctgggagaacatggcattcatcttcctcaaccgcttt
ttggatctgactgatgcaattgaagaaggaactctggatgcccttgaccactctgacttt
caggatacagacattccctttgaggtgccacttccagccaagcagcatgtgccggaggct
cagagggaagaggttcgagactgggtactcacggtctcaatggaccagcggctggagcag
gttctacctcgggatgagcgtggtgcctacgaagcttccctggtggcagtgagcactgga
gttcgggcactaccctgcctcattacagggtaccccattctgaggaacaaaattgaattt
aagcggccagggaaggcagccaacaaggacaactggaataagttccttatggctatcaag
acttcccacagccccgtgtgccaagatgtgctgaaattcattagtcagtggtgtggaggg
ctacccagcaccagtttttcctttcagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (7)   
   UniProt (2)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (5)   
   Pfam (5)   
All databases (31)   

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