KEGG   Canis lupus familiaris (dog): 483632
Entry
483632            CDS       T01007                                 
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
  KO
K08331  autophagy-related protein 13
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa04136  Autophagy - other
cfa04140  Autophagy - animal
cfa04211  Longevity regulating pathway
cfa05010  Alzheimer disease
cfa05014  Amyotrophic lateral sclerosis
cfa05016  Huntington disease
cfa05017  Spinocerebellar ataxia
cfa05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    483632 (ATG13)
   04136 Autophagy - other
    483632 (ATG13)
 09150 Organismal Systems
  09149 Aging
   04211 Longevity regulating pathway
    483632 (ATG13)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    483632 (ATG13)
   05014 Amyotrophic lateral sclerosis
    483632 (ATG13)
   05016 Huntington disease
    483632 (ATG13)
   05017 Spinocerebellar ataxia
    483632 (ATG13)
   05022 Pathways of neurodegeneration - multiple diseases
    483632 (ATG13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cfa04131]
    483632 (ATG13)
   03029 Mitochondrial biogenesis [BR:cfa03029]
    483632 (ATG13)
Membrane trafficking [BR:cfa04131]
 Autophagy
  Autophagosome formation proteins
   ULK complex
    483632 (ATG13)
   Atg1 complex
    483632 (ATG13)
Mitochondrial biogenesis [BR:cfa03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-independent mechanism factors
    483632 (ATG13)
SSDB
Motif
Pfam: ATG13
Other DBs
NCBI-GeneID: 483632
NCBI-ProteinID: XP_005631334
Ensembl: ENSCAFG00000009170
VGNC: 38217
UniProt: A0A8C0YX87 A0A8I3PTC5
Position
18:complement(41563260..41615540)
AA seq 550 aa
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
TYPSVEDSQEVCTTSFSTSPPSQCVFTVTKAHFQTPTPVVTDTLRVPMAGLAFSHQLSSS
RLSYQPAALGVGSADLAYPVVFAAGLNTTHPHQLMVPGKEGGVPLAPNQPAHGAQADQER
LATYTPSDGAHCAVTPSSSEDTETVSNSSEGRASPHDVLETIFVRKVGAFVNKPINQVTL
TSLDIPFAMFAPKNLELEDADPMVNPPDSPETESPLQGSLHSDGSSGGSSGNTHDDFVMI
DFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVR
EFDAFVETLQ
NT seq 1653 nt   +upstreamnt  +downstreamnt
atggaaactgatctcaattcccaggacagaaaggacctggacaagtttattaaatttttt
gccctcaagactgtccaagtgattgtccaggctcgacttggcgagaagatttgtactcgt
tcgtcttcatccccaacgggttcagattggttcaatttagcaatcaaagacatcccagag
gttacacatgaagcaaaaaaggcactggccgggcagttgcctgcagtcgggagatcgatg
tgtgtggagatctctctcaagacatctgagggagattctatggaactagaaatttggtgt
ctcgaaatgaatgaaaagtgtgataaagagattaaagtgtcctacacggtgtacaacaga
ctgtcgctgctgctgaagtccctccttgccataactagggtgacaccagcttatagactc
tccagaaaacaggggcatgaatatgtcatattgtacaggatatattttggggaagttcag
ctgaatggcttaggagaaggtttccagacagttcgtgttgggacagtaggcacccctgtg
ggcaccatcactctttcttgcgcttacagaattaacttggcatttatgtctaccaggcaa
tttgagaggaccccacctatcatggggattatcattgatcactttgtggaccgtccctac
cccagctcctcacccatgcacccctgcaattacagaactgctggtgaggacactggagta
acatatccttctgtggaagattctcaagaagtgtgtaccacctctttttccacctcccct
ccatctcagtgtgtgtttactgtcacaaaggcacattttcagacccctactcctgtggtg
acggacactctgagggtccccatggcaggactggccttttcccatcaactctcaagctct
cgcctttcctatcagcctgctgccctgggcgttggatcagctgacctggcttacccagta
gtgtttgctgctggcctaaacaccacacaccctcaccagctcatggttcccgggaaggaa
ggtggggtaccccttgctcccaaccaacctgctcacggtgcccaggctgaccaggagaga
ctggcaacctacaccccttctgacggggcccactgcgctgtcacaccttccagcagcgag
gatactgaaactgtatcaaacagcagtgagggccgggcatccccccacgatgtcttggag
accatctttgtccgaaaagtgggggcttttgtcaacaagcccatcaaccaggtgaccctg
accagtctggacataccctttgccatgtttgctcccaagaatttggagctggaggatgct
gatcccatggtgaatcctccagattccccagagactgaatctcctctccagggcagcctg
cactctgatggctccagtgggggcagcagtggcaatacccatgatgactttgttatgatc
gacttcaaaccggctttttctaaagacgacattcttccgatggacttggggaccttctat
cgtgaatttcagaatcctcctcagctgagcagcctctccatagatatcggggcacagtcc
atggctgaggacttggactcactaccagagaagctggctgtgcacgagaagaatgtccga
gagtttgatgcctttgtagaaaccctgcagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (8)   
   KEGG PATHWAY (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (87)   
   UniProt (2)   
   RefSeq(pep) (85)   
DNA sequence (85)   
   RefSeq(nuc) (85)   
Protein domain (1)   
   Pfam (1)   
All databases (194)   

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