KEGG   Canis lupus familiaris (dog): 485842
Entry
485842            CDS       T01007                                 
Symbol
CHMP4B
Name
(RefSeq) charged multivesicular body protein 4b
  KO
K12194  charged multivesicular body protein 4A/B
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa03250  Viral life cycle - HIV-1
cfa04144  Endocytosis
cfa04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    485842 (CHMP4B)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    485842 (CHMP4B)
  09143 Cell growth and death
   04217 Necroptosis
    485842 (CHMP4B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cfa04131]
    485842 (CHMP4B)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cfa04147]
    485842 (CHMP4B)
Membrane trafficking [BR:cfa04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    485842 (CHMP4B)
Exosome [BR:cfa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   485842 (CHMP4B)
  Exosomal proteins of other body fluids (saliva and urine)
   485842 (CHMP4B)
  Exosomal proteins of colorectal cancer cells
   485842 (CHMP4B)
SSDB
Motif
Pfam: Snf7 SYF2 DUF2290 DUF6437
Other DBs
NCBI-GeneID: 485842
NCBI-ProteinID: XP_542966
Ensembl: ENSCAFG00000007478
VGNC: 54643
UniProt: A0A8C0QE10 A0A8I3PLN8
Position
24:22640928..22694729
AA seq 224 aa
MSVFGKLFGAGGGKAGKGGPTPQDAIQRLRDTEEMLSKKQEFLETKIEQELTAAKKHGTK
NKRAALQALKRKKRYEKQLAQIDGTLSTIEFQREALENANTNTEVLKNMGYAAKAMKAAH
DNMDIDKVDELMQDIADQQELAEEISTAISKPVGFGEEFDEDELMAELEELEQEELDKNL
LEISGPETVPLPNVPSITLPSKPTKKKEEEEDDMKELENWAGSM
NT seq 675 nt   +upstreamnt  +downstreamnt
atgtcggtgttcgggaaactgttcggggcaggagggggtaaggccggcaagggcggtccg
acccctcaagatgccatccagcggctgcgggacacggaggagatgctaagtaaaaaacag
gaattcctggagaccaagatcgagcaggagctgaccgctgccaagaagcacggcaccaaa
aacaagcgcgcggccctccaggcactgaagcgcaagaagaggtatgaaaagcagctggcg
cagatcgacggcacactatcaaccatcgagtttcagcgggaagccctggagaatgccaat
accaacaccgaggtgctcaagaacatgggctatgctgctaaggcgatgaaggctgcccat
gacaacatggacatcgataaagttgatgaattaatgcaggacattgctgaccagcaagaa
cttgcagaggagatttcaacagctatttcaaaacctgtaggatttggagaagagtttgat
gaggatgaactcatggcagaattagaagaactagaacaggaagaactagacaagaatttg
ctggaaatcagtggacccgaaacagtccctctaccaaatgttccctctataaccttacca
tcaaaacccaccaagaagaaggaagaggaagaggatgacatgaaggaattggagaactgg
gctggatccatgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (7)   
   UniProt (2)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (4)   
   Pfam (4)   
All databases (38)   

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