KEGG   Canis lupus familiaris (dog): 608527
Entry
608527            CDS       T01007                                 
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2
  KO
K10897  partner and localizer of BRCA2
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa03440  Homologous recombination
cfa03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    608527 (PALB2)
   03460 Fanconi anemia pathway
    608527 (PALB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cfa03400]
    608527 (PALB2)
DNA repair and recombination proteins [BR:cfa03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA complex
     608527 (PALB2)
   FA (Fanconi anemia) pathway
    Downstream FA components
     608527 (PALB2)
SSDB
Motif
Pfam: PALB2_WD40
Other DBs
NCBI-GeneID: 608527
NCBI-ProteinID: XP_850671
Ensembl: ENSCAFG00000030772
VGNC: 44245
UniProt: A0A5S9I5Z8 A0A8P0SS42
Position
6:23776491..23804551
AA seq 1195 aa
MEEPPGKPLSCEEKEKLKEKLAFLKREYSKTLARLQRAQRAEKFKNSIKKTAEEHDCLLQ
QDTLPQLNHSESKNKVSPCDTLQISTHLDEETGEKTPVTFDIEPESFNPEHGSVEELHIQ
RTGDIQEHFPYWVGGPGVEKRQSKLPGRRKKQQKRTFTSQARDSLFDTDSLILSGKRLKE
QEENNGENPRTPITKRTYLSSSMSDIPGSPSPVMETNVRGILIPPTAKPQRDVDALVRGN
NFPMVPTLASFTLSNSSSSHHLEHKPPKDDWELITHSLKNINPASPVNLEAQVKKITVSK
DNPGISASGQLPQSPDLEPDNSCSPDKLIYDNLSADGNQNLKGQNHTEESLKFPHNTLDG
RNESLQENEVLSQSKSLSPEVISPASTENQTYSCTVLEGLLFPAEYYVRTTRRMSNCQRK
VALEAVIQSHLGVRKKEFKNKSKDATKNLNLCSEETDQSEIRTSDTCTKQSSSRRSQKHL
SLTEVHSPTGPTEDNLPRKAVTQPSGGRHRRKRKSICPPVLDHHELLLPTPSTSGVNRSK
KEITLHKDQNEKVIIQGKKDHCQKEDSLSSRKNGYLALDSAVFKASFHENEMLSLKQLSS
FLKTTDFQLPDEIFGPLKLEKLKSYSEKTVEPIVSKMYAQKHLKEGNCIVLEELTPTQID
TEMKDLEEEILVLPEKAQPKMPSLTSRSQKKGLSSSILLFTPLNTSAPENSNRPTADMCS
PTFPILGTTPAFGSQALSEKVCTETVRPTCSTPQLPHLKDSDHVLASAAHTLKDSDQKQL
DNWTNLSKPGGTLVVSGRDGQPSCDCDSGPQATPLPTESVPFKDNQLCGNPQPESWKQST
EQEQSASLTEVAELPACQSSNPGHLQLVSKLKNPSGSCSVDVSAMWWEIAGFKEPCIITA
CEYVVSLWKPLNTLQWEKLYSWHFTEVPVLQIVPVPDVCNLVCVALGNLEIREIRSLLCS
SDGKREKQVLLSSGNIKAVLGLTGRRLVSSSGTLCDQQVEIMTFAEDGRSKEKQFLMPPE
ETVLTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIGDRYQASVCRKAYSEMGLL
FVVLSHPCAKESELLGSPVFQLIVINPKTTLSVGVMLYCLPQGQAGRFLEGDVKDHFAAA
VLTSGTIAIWDLLLGHCTALLPPISDQHWSFVKWSGTDSHLLAGQKDGNIFVYRY
NT seq 3588 nt   +upstreamnt  +downstreamnt
atggaggagcctcctgggaagcccctcagctgtgaggagaaggaaaagttgaaggaaaaa
ttagcattcttgaaaagggaatacagcaagacactggcccgccttcagcgtgctcaaaga
gctgagaagtttaagaattctattaagaaaacagcggaagaacatgattgcttgcttcag
caggatactttaccacagctaaaccactcagaatctaaaaataaagtatctccttgtgac
acattgcaaattagcactcatctggatgaagaaactggagaaaagacacctgtcacattt
gacattgagcctgagtccttcaaccctgaacatggctctgtggaagaattacatatacaa
agaacaggtgatatccaagaacattttccctactgggtcggtggccctggtgttgagaaa
aggcagagtaagctgccagggagaagaaaaaagcagcagaaaagaacatttacttcacag
gcaagagactctttgtttgacacagattcactcatactgtctggaaaaagactaaaggaa
caggaagaaaacaatggagaaaatcctaggacacctataactaaaagaacttacctttca
agttctatgtctgacattcctggttctccatcaccagtgatggaaactaatgtaaggggt
atattaattccaccaactgccaaaccacaaagagatgttgatgcactcgtaagaggaaat
aatttccccatggtgcctacacttgcttcatttactctatcgaatagcagtagcagtcat
caccttgaacataagcctcctaaagatgactgggaacttattactcacagtttaaaaaac
attaaccctgcttcacctgtaaacctagaggcacaagtgaaaaaaattacggtctctaaa
gataacccaggtataagtgcaagtggccagctgcctcaaagtcctgacttagagccagat
aattcatgctctccagataaactcatttatgataacttatcagcagatggaaaccaaaac
ttaaaaggacagaatcacacagaagagtctttaaaatttccccataacactcttgatggt
agaaatgaaagtcttcaggaaaatgaggttttaagtcaatctaagagtcttagcccagaa
gtaatctctcctgcttctacagaaaatcaaacatattcttgcacagtgcttgaaggcctt
ctatttcccgcagaatattatgttagaacaacacggcgcatgtcaaattgtcagaggaag
gtagccctggaggctgtaattcaaagtcatttgggtgtcagaaagaaagagtttaaaaat
aaaagtaaagacgcaactaaaaatttaaacctttgcagtgaagagactgaccagagtgaa
attaggacttctgacacatgcacaaaacaatcaagttcaagaagatctcaaaaacatctg
tccttaactgaagtccactctcccactgggccaactgaagataaccttcccaggaaagca
gttacccagccatctggtggaagacacagaagaaaaagaaagtcaatctgcccacctgta
ttagatcatcatgaactacttttgccaactcctagcacatcaggtgttaatagatccaag
aaagaaatcaccttacacaaagatcagaatgaaaaagtaattattcaggggaagaaagat
cactgtcaaaaagaagactccctttcttccagaaagaatggttatctagctttggattct
gctgtgttcaaggcttcatttcatgagaatgagatgctaagtttaaagcaactgtcatct
tttctcaaaaccacagactttcagttacctgatgaaatctttggacctcttaagcttgaa
aaactgaagtcctattcagaaaaaacagttgagcctattgtatcgaaaatgtatgcacag
aagcatcttaaggagggaaactgtattgttttggaagaattgactcctacacaaattgat
actgaaatgaaggacttggaagaggaaattctggttctcccagaaaaagcacaacctaaa
atgccaagcctaacaagccggtctcagaagaagggtctttcttcatccatattacttttc
actcctttaaataccagtgcccccgagaacagtaacaggccgacagcagacatgtgttcg
cccactttccccatcttaggcacaactccagcttttggctcccaagcactcagtgaaaaa
gtgtgcacagagactgtcagaccaacttgctctacaccccaacttcctcacttaaaagac
agtgatcatgtgctcgcttcggcagcacatacactaaaagacagtgatcagaaacaactc
gacaattggaccaacttgtcaaaaccaggtggcaccctggttgtgtcaggtcgagatgga
cagccttcctgtgactgtgattctggtccccaggcaacacctcttcccactgagtcggtc
cctttcaaagacaaccagctgtgtggaaatccccagccggagtcatggaaacagtccact
gaacaggaacaatctgcttccctgactgaagtagcagagcttcctgcttgtcaaagctca
aacccaggccacctccaattggtttcaaagttaaagaatccttctggttcctgttcagtg
gatgtgagtgccatgtggtgggaaatagcgggtttcaaagagccatgtatcataactgcc
tgtgaatatgtagtttctctttggaaacctctcaatactttgcagtgggaaaaactttat
tcctggcactttacagaggttccagtattacagatagttccagtgcccgatgtttgtaat
ctcgtgtgtgtggctttgggaaatttggagatcagagaaatcaggtcattactttgctcc
tctgatggtaaacgtgaaaagcaagtactactgagttctggaaatataaaagctgtgctt
ggcctgacagggaggaggctagtcagtagcagtgggaccctttgtgaccaacaagtagaa
atcatgacttttgcagaagatggaagaagcaaagaaaaacaatttttgatgccccctgaa
gagactgtattaacttttgccgaggtccaagggatgcaggaagctctgcttggtactact
ataatgaacaacattgttatttggaatttaaagactggtcagctcctgaaaaagatgcac
attggtgatcgctaccaagcttcagtttgtcgcaaagcctattctgaaatggggctcctg
tttgttgttctgagtcatccttgtgccaaagagagtgagctgttgggaagccctgtgttt
cagctgatcgtgattaaccctaagacaactctgagtgtgggggtgatgctgtactgtctt
cctcaagggcaggctggaaggttcctggagggggacgtgaaagatcattttgcagccgca
gtgttgacttctggaacaattgccatttgggacctacttctgggtcattgtaccgctctc
ctcccacctatctctgaccagcattggtcctttgttaaatggtcaggtacagattctcat
ttgctggctggacaaaaagatggaaatatatttgtataccgctactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (7)   
   UniProt (2)   
   RefSeq(pep) (5)   
DNA sequence (7)   
   RefSeq(nuc) (5)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (53)   

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