KEGG T05012: CI104

Citrobacter farmeri: CI104_00445

Entry

CI104_00445       CDS       T05012

Name

(GenBank) DNA helicase RecG

K03655

ATP-dependent DNA helicase RecG [EC:5.6.2.4]

Organism

cfar Citrobacter farmeri

Pathway

cfar03440

Homologous recombination

Brite

KEGG Orthology (KO) [BR:cfar00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CI104_00445
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cfar03400]
    CI104_00445
Enzymes [BR:cfar01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CI104_00445
DNA repair and recombination proteins [BR:cfar03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     CI104_00445

SSDB

Motif

Pfam:

DEAD RecG_wedge Helicase_C ResIII RecG_dom3_C tRNA_anti-codon AAA_30 SecA_DEAD SNF2-rel_dom SLFN-g3_helicase IstB_IS21 Helicase_RecD

Other DBs

NCBI-ProteinID:

AST77661

Position

complement(90424..92505)

AA seq 693 aa
MSGRLLDAVPLSSLTGVGAAQSSKLAKIGLHTVQDLLLHLPLRYEDRTQLYPIGELLPGV
YATVEGEVLNCNITFGGRRMMTCQISDGSGILTMRFFNFSAAMKNSLATGRRVLAYGEAK
RGKYGAEMIHPEYRVQGDLSTPELQETLTPVYPTTEGIKQATLRKLTDQALDLLDTCAIA
ELLPPELLPGMLSLPEALRTLHRPPPTLQLSDLETGQHPAQRRLILEELLAHNLSMLALR
AGAQRFHAQPLRANDKLKNQLLASLPFKPTGAQARVVAEIEHDMALDIPMMRLVQGDVGS
GKTLVAALAALRAIAHGKQVALMAPTELLAEQHANNFRNWFAPLGVEVGWLAGKQKGKAR
LAQQEAIASGQVQMVVGTHAIFQEQVQFNGLALVIIDEQHRFGVHQRLALWEKGQQQGFH
PHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVAIPDTRRSDIIDRVRNACT
QEGRQAYWVCTLIEESDLLEAQAAEATWEELKLALPELNVGLVHGRMKPAEKQAVMAAFK
QGDLHLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKA
PLSKTAQLRLQVLRDSNDGFVIAQKDLEIRGPGELLGTRQTGNAEFKVADLLRDQAIIPE
VQRIARHIHERYPQEAKALIARWMPETERYSNA

NT seq 2082 nt +upstreamnt +downstreamnt
atgagtgggcgcctgttagatgctgtcccgctcagttcactcactggcgttggcgcagcg
caaagcagcaagctggcgaaaattggtctgcataccgtgcaggacctgctgttacacctc
cctctgcgctatgaagaccgaacccaactctatcccatcggagaactgctgcccggcgtt
tatgccaccgttgaaggggaagtactgaactgcaatatcaccttcgggggtcgccggatg
atgacctgtcagatcagcgacggttccggcattctgacaatgcgctttttcaactttagc
gcggcgatgaaaaacagcctcgcgaccggacggcgcgtactggcttacggtgaagcgaaa
cgcgggaagtacggtgcggagatgatccacccggaataccgggtacagggcgatctcagt
acgccggagttgcaggaaaccctcaccccggtttatcccaccactgaaggtatcaagcag
gcgacactgcgtaaactcaccgaccaggcgttggatctgctggacacctgcgccatcgct
gaacttctgccgccggaattattaccgggcatgctcagcctgcccgaagcgctccgcacg
ctgcatcgcccaccgccaacgctacagttaagcgatctcgaaactggtcaacatccggca
cagcgtcgtctgatcctggaggagttactggcacataacctgagcatgctggcgcttcgt
gcgggcgcgcagcgcttccatgcccaaccgctgcgcgccaacgacaagctgaaaaaccaa
ctgttagcctcgctgccttttaagccaaccggtgcgcaggcccgcgtggtggcggaaatc
gagcacgatatggcgctcgatatcccgatgatgcgtctggtgcagggcgatgtcggctcc
ggtaaaacgctggtcgccgcgctcgcagccctgagagcgatcgcacatgggaaacaggtc
gcattgatggcaccaaccgagttgctggcggaacagcatgccaataacttccgtaactgg
tttgcgcctcttggcgtagaggtcggctggctggcagggaaacaaaaagggaaagctcgc
ctcgcgcaacaagaggcgatcgccagcgggcaggtgcagatggtggtgggaacgcacgcg
attttccaggaacaggtgcagttcaacggtcttgcactggtcatcatcgacgaacaacac
cggtttggtgtacatcagcgcctcgcgctgtgggaaaaaggccagcagcagggtttccat
ccgcatcagttgatcatgaccgctacccccattccacgaacgctggcgatgaccgcctac
gcggatctcgatacctccgtcattgacgaactgccgcccggacgtacccccgtcacgacg
gttgctattccggatacgcgccgcagcgacattattgatcgcgtccgcaacgcctgtacg
caggaaggtcgccaggcctactgggtctgtacgctgattgaagaatctgacctgttagaa
gcgcaggcagccgaagccacgtgggaagagctgaaactcgccctgccggaactgaacgtc
ggcctggtccacgggcgcatgaaaccggccgagaaacaggcggtgatggcggcgtttaaa
cagggcgatcttcacctgctggtcgccaccacggtgatcgaagtgggcgtggatgtccct
aatgccagtctgatgattatcgaaaacccggagcgtctgggtctcgcgcagttacatcag
ttgcgtggtcgcgtagggcgcggcgcggtggcttcccactgtgtgctgctctataaagcc
ccattgtccaaaaccgcacagctgaggttgcaggtactgcgtgacagcaacgatggcttt
gtgattgcgcaaaaagatctcgaaattcgcgggcccggtgaattgttgggtacgcggcag
acggggaatgcggaatttaaggtggcagatttactgcgcgatcaggccattattccggaa
gttcagcgcattgcacgtcacattcatgaacgttacccacaagaggcaaaggcgttgatc
gcgcgttggatgccggaaacagaacgctattctaacgcctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (21)   

Download RDF

DBGET integrated database retrieval system