KEGG   Citrobacter farmeri: CI104_00540
Entry
CI104_00540       CDS       T05012                                 
Name
(GenBank) 3-deoxy-D-manno-octulosonic acid transferase
  KO
K02527  3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
Organism
cfar  Citrobacter farmeri
Pathway
cfar00540  Lipopolysaccharide biosynthesis
cfar01100  Metabolic pathways
Module
cfar_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:cfar00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00540 Lipopolysaccharide biosynthesis
    CI104_00540
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01005 Lipopolysaccharide biosynthesis proteins [BR:cfar01005]
    CI104_00540
Enzymes [BR:cfar01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.99  Transferring other glycosyl groups
    2.4.99.12  lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
     CI104_00540
    2.4.99.13  (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
     CI104_00540
    2.4.99.14  (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
     CI104_00540
    2.4.99.15  (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
     CI104_00540
Lipopolysaccharide biosynthesis proteins [BR:cfar01005]
 Lipid A
  CI104_00540
SSDB
Motif
Pfam: Glycos_transf_N Glycos_transf_1 Glyco_trans_1_4 PCC_BT
Other DBs
NCBI-ProteinID: AST77677
Position
complement(106873..108150)
AA seq 425 aa
MLELLYTALLYLIQPLIWIRLWVRGRKAPAYRKRWGERYGFYRRPLKPGGIMLHSVSVGE
TLAAIPLVRALRHRYPDLPITVTTMTPTGSERVQSAFGSDVQHVYLPYDLPDALGRFLNQ
VDPKLVLIMETELWPNLIAALHKRHIPLVIANARLSARSADGYAKLGKFIRRILRRITLI
AAQNEEDGQRFVTLGAKSNQVTVTGSLKFDISVTPQLAAKAVTLRRQWAPHRPVWIATST
HDGEESIIIAAHQALLHQFPNLLLILVPRHPERFPDAINLVREAGLSYTTRSSGEVPSAS
TQVVVGDTMGELMLLYGIADLAFVGGSLVERGGHNPLEAAAHAIPVLMGPHTFNFKDICA
RLEQASGLITVTDATSLAKEVSSLLTDADYRNFYGRHAVEVLYQNQGALQRLLQLLEPYL
PPKTH
NT seq 1278 nt   +upstreamnt  +downstreamnt
atgctcgaattgctttacaccgctcttctctaccttattcagcctttgatctggatacgg
ctttgggtgcgcggacgtaaggccccggcctaccgtaaacgctggggtgaacgctacggt
ttttatcgccgccccctgaaaccgggtggaattatgctccattcggtctctgtcggcgaa
acactggcagcaattcctttggtccgcgccctgcgacaccgctatcccgacttgccgatc
acggtcactacgatgacgccgaccggctctgagcgtgtccagtccgccttcggtagcgat
gttcagcacgtctacctgccttatgatttacccgatgcgctgggacgcttcctgaatcag
gtcgaccccaagctggtactgattatggaaacggagctgtggcctaatctgattgccgca
ctgcataaacgccatattccgctggtcatcgccaatgcgcgtctttccgcccgttccgct
gacggttacgcgaagcttgggaaatttattcgccgaatcctccgtcgtatcacgctcatt
gcggcgcaaaatgaagaggatggtcagcgctttgtgacgctgggcgcgaagagcaatcag
gtgactgtcaccggcagtctgaagttcgatatttccgtaacgccacaactcgccgcgaag
gcggttacactgcgtcgccagtgggcgccgcatcgacctgtgtggatagcgaccagtacc
catgatggcgaagagagtattattatcgccgcacatcaggcattgttacaccagttcccc
aacctgctattgattctggtcccgcgtcatccggaacgcttcccggatgcgattaacctc
gtgcgtgaagccggactaagctatacaacacgttcctccggtgaagtgccttcggccagt
acgcaggtcgttgtaggtgatacgatgggtgaactgatgctactttacggaattgcagat
ctggcgtttgtcggaggatctctggttgagcgtggcggacataacccgctggaagccgcg
gcacatgcgattcccgtgctgatggggcctcacaccttcaacttcaaagatatctgcgcc
cgtctggaacaagccagcggtttaattacggtcaccgacgccacaagcctcgccaaagag
gtttcctctttactgaccgatgccgattatcgtaatttctatggtcgtcacgcagttgag
gttctctatcaaaaccagggtgcgctacagcgcctgctacagctgctggaaccttatctg
ccaccgaaaacgcattga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (2)   
   KEGG MODULE (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (10)   
   KEGG ENZYME (4)   
   KEGG REACTION (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (31)   

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