KEGG   Citrobacter freundii: CFNIH1_16400
Entry
CFNIH1_16400      CDS       T03077                                 
Name
(GenBank) conjugal transfer protein TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
cfd  Citrobacter freundii
Pathway
cfd02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:cfd00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CFNIH1_16400
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cfd02044]
    CFNIH1_16400
Enzymes [BR:cfd01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     CFNIH1_16400
Secretion system [BR:cfd02044]
 Type IV secretion system
  Trb secretion system protein
   CFNIH1_16400
SSDB
Motif
Pfam: T2SSE TrwB_AAD_bind nSTAND3 AAA_16 FtsK_SpoIIIE AAA_30 Zeta_toxin AAA_25 ResIII DEAD AAA_28 IstB_IS21 CbiA ATPase AAA_7 ABC_tran MMR_HSR1 AAA_19 MobB Phosphatase Sigma54_activat GTP_EFTU AAA_29 AAA_22 CLP1_P TsaE Parvo_NS1
Other DBs
NCBI-ProteinID: AHY13043
Position
3403992..3405071
AA seq 359 aa
MSAVPQIQPEPRSSAAASQDRRIQMLRTAMGPLIAAALEDPDVVEIMLNPDRTLWVDRLS
SGRSPLGVEMPEADGERIIRLVAAHVGAEVHRGQPLLTAELPETGERFEGILPPAAPGPA
FALRKRAVSIIGLDRYVADGILTAGQAELLRRAVRERQNILIAGGTSTGKTTLANALLAE
IAATGDRVLVLEDTIELQCAARDHVPLRTRAGVVTMTELVRATMRLRPDRVIVGEVRGGE
ALDLIKVWGTGHPGGIATIHAGSALGALLRLEQLILEVAVNPPRALIAEAVNVVINIAGR
GRKRHVETIARVVGFDGTGYRLADALETPFPELTPVPLAADAAAHSRPPTNLENCHDAR
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgagtgccgttccacagatccagcccgaacctcgctcatccgcagcagcgtcccaggat
cgccgcatccagatgctgcgcactgcaatggggccgctgatcgccgctgcgctcgaagac
ccggatgtggtggaaatcatgctcaaccccgatcgcaccctgtgggtggatcggctgtcg
tcgggtcgctcgccgctgggcgtggagatgcccgaggccgatggtgaacgcatcatccgc
ctggtcgccgcgcatgtcggcgcggaggtgcatcgcggccagccgctcttgaccgccgag
ttgccggaaaccggcgagcgtttcgagggcatcctgcctccggccgccccggggccagcc
ttcgcgctacgcaagcgggccgtgagcatcatcggcctggatcgctacgtggccgacggc
atcctgaccgccgggcaggccgagttgctgcgccgcgccgtgcgcgagcggcagaacatc
ctaatcgccggcggcaccagcaccggcaagaccacgctggcgaacgcgctgctggccgag
atcgccgccacaggcgaccgcgtgctggtgctcgaagacaccatcgagctgcaatgcgcg
gcccgcgaccatgtgccgctgcgcacccgcgccggcgtcgtcaccatgaccgagctggtg
cgggccacgatgcgcctgcggcctgaccgcgtgatcgtcggcgaggtgcgcggcggcgaa
gccctcgacctcatcaaagtgtggggcaccggccaccccggcggcattgcgaccatccat
gccggctccgcgctgggcgcgttgctgcgcctcgaacagttgattctcgaagtcgctgtg
aatccgccgcgggcgctgatcgccgaggcggtcaacgtcgtcatcaacatcgccggacgc
ggccgcaagcgccacgtcgaaaccatcgcccgtgtcgtcggcttcgacggcaccggctat
cgcctggcggacgcactggaaacgccgtttcccgagctgacgccggttcctctcgcagcc
gacgccgctgcacattcccgtcccccaaccaacttggagaactgccatgacgcacgttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (27)   
   Pfam (27)   
All databases (36)   

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