KEGG   Camponotus floridanus (Florida carpenter ant): 105252018
Entry
105252018         CDS       T03919                                 
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
  KO
K02999  DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
Organism
cfo  Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cfo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    105252018
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cfo03021]
    105252018
Enzymes [BR:cfo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     105252018
Transcription machinery [BR:cfo03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     105252018
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4 zf_C2H2_10
Other DBs
NCBI-GeneID: 105252018
NCBI-ProteinID: XP_011257489
UniProt: E2AG26
Position
Unknown
AA seq 1686 aa
MMGKYKQRLTPKHQDSHHLLFSMFTANDIRNLSVTKIRTSLSFNILGHPLKGGLYDPSLG
TTKNFELCSTCGYNSFKCPGHFGHIELPVPVVNPLFHRELATLFKLSCLNCFTFQIPPDI
KTLLAAKLKLLYQGQLADLEILDQEITYVKSNEKDKEKQTQYICDIIDTYMQNFFNRTRL
SQSMIESHEHKSNMKNINTQWHIYVKNVLKEYVRNKVGKCRNCNNVLPKISTLQNKIMIR
NKGGVSKEILSHEVIHKLHTVMIMPNQSKEYLRQLWNNEKDFFQIIIPCLELVDIEYPTD
IFFFEVIPVLPPIVRPVNFINGQMIEHPQTYIYKNIIQDCLILRNIIQTIQDGSIDHLPQ
ASRLVFEQIRGNTTVEKLHNAWQTLQSNIDHLMDRDINRTPESINGLGLKQILEKKEGII
RMHMMGKRVNFAARSVITPDPDLNIDEIGIPEAFARKLTYPTTVTPWNVVELRRLVLNGP
DVHPGAVIIENEDGSVQAINSNDSMQREAIAKRLLTTNDKTNESFTGIKIVHRHLQNGDV
LLLNRQPTLHKPSIMAHKARVLKGEKTLHLHYANCKAYNADFDGDEMNAHFPQNELARSE
GYNIANVCNQYLVPKDGTPLSGLIQDYIIAGVQLTTRGQFFSQTHYTQLVYTALSMVQGD
VILLPPTIIKPKPLWSGKQVLSTVIINIIPSDKTRINLISNAKINVKEWQVETPRRWKCG
VEFKNPIIMSEAEVVIRHGELLCGVLDKMHYGATSYGLIHCIYELYGEMYASKILSAFAK
LFQTFLRYNGFTLGVEDILITHKIDKKRKELILDCRKIGEDVQKSIIKVSNEVSMDEFKD
KVEEFYWHNSKFRAQVDHKYKSVLDVYTNDINRTCLQLGLFKKFPKNNLQLMVQSGAKGS
MVNTMQISCLLGQSELEGKRPPLMISGKSLSSFSAYDPTPRAGGFIDSRFMTGIKSQECF
FHCMAGREGLVDTAVKTSRSGYLQRCLVKHLEGLVIGYDATVRDYDGSLIQFYYGEDGLD
IPGSRFLRKEQMAFLADNKDAIIDTKLLEYLKTDNKKIRKMIKKIKKWEDKNGSSLKKKR
ISEFTRFSIENQNNLKEKRSIDKSNGRSKAALSLMRKWIRTKEEVKETFRAQCAKCPDPV
TSKYRQDIEFGVLPERIEGLIDEYVFHSPKIKKSILRDLLSIKIMKSICPPGEPVGLLAA
QSIGEPSTQMTLNTFHFSGRGDMNVTLGIPRLREILMIASKNIKTPSMEIPFQNNLQNLE
KQAKKLRLKLTKCVLRDVLKDITVSRTIEKSPYRKLVYTIMIEYLPYKSYKNEFSIHRQD
VIKRTEKFFFKNIFKEIEKLTKASKVLLHYEGEKRQASNDDALDQFDPDDIMSENTGRRM
QMDLGEMHESSDEEEIAEDADATMSRSLSRHQENQEYEDSEEEVEDITNYKEEEADNNNI
NKNLENTEDNEEDDYTKEKLDNRKNDKYNRKKCVLDSYLYATDYDYDESKLSWCKFTFWL
PLKMIKLDLPTIIKNAADKTVLCEIPHIKKAFTFQNSENETILKTDGLNIVEMFKYDKIL
NLNRLYSNDIYNISLTYGIEAANKVIVREVRDIFKMYGITVDCRHLSLIADYMTFDGTFQ
PLSRKGMENSASPLQQISFESSLAFLKSATLQGKKDDILSPSSRLMLGQPCKSGTGAFSV
LPSLYM
NT seq 5061 nt   +upstreamnt  +downstreamnt
atgatggggaaatataagcaacgtctaacaccaaaacatcaagactctcatcatttatta
ttctcaatgttcacagcaaatgacataaggaatttaagtgtaacaaaaataagaacatct
ttatcttttaatatacttggacatccactaaaaggtggattatatgatccatctttaggc
acaacaaagaattttgaactatgcagcacatgtggatataatagcttcaaatgtccaggt
cactttggacacatagaattgccggtacctgttgtcaatccattatttcatagagaatta
gccacattgttcaaattgtcgtgcttaaattgttttacttttcaaataccaccagatatc
aagacattacttgctgcaaaattaaagttactttatcaagggcaacttgctgatcttgaa
attttagatcaagagataacatatgtcaaatctaatgaaaaagataaagaaaaacaaact
caatatatttgtgatataattgatacttatatgcaaaacttttttaacagaaccagactc
agtcagtctatgattgaaagtcatgagcataaaagcaacatgaagaatatcaatacacaa
tggcatatctatgttaaaaatgtacttaaagaatatgtcagaaataaagttggaaaatgt
aggaattgtaataatgttttaccaaaaatttcaacgttacaaaataaaataatgataaga
aataaaggaggagtctccaaggaaatattgtcacatgaagtgattcataaattacataca
gtgatgattatgccaaatcagtctaaggaatatctacgacaattatggaataatgaaaag
gatttttttcagataattataccctgcttagaattagtggatattgaatatccaactgat
atattttttttcgaagtaatacccgtgctaccgcccattgtgcgaccagtgaactttatt
aatggtcaaatgatcgaacatcctcaaacttacatctataagaacatcatacaagattgt
ttgatcttaagaaatattatacaaacgattcaagatggaagtattgatcatttacctcaa
gcgagtcgacttgtctttgaacaaataagaggaaatacaacggtcgaaaagctacacaac
gcctggcaaaccttgcaaagcaatattgatcatctgatggatcgcgacataaataggact
ccagaatctatcaatggtttaggcttgaaacaaattcttgagaagaaagaaggtattatt
agaatgcacatgatgggtaaaagagtgaattttgctgcacgttcggtcatcactccagat
cctgacttaaatatcgatgaaatcggcattcccgaagctttcgctcgaaaattaacttat
cctacaactgtaacaccgtggaacgtcgttgaattgcgacgattagttttaaatggaccc
gatgttcatcctggagcggttataatagaaaatgaagatggatcggtacaggcgattaac
agtaacgattctatgcaaagagaagctattgctaagcgtcttttgacaacaaatgacaaa
accaacgaatccttcactggcatcaaaatagtacatcgacatcttcaaaatggcgatgtg
ttgttattaaatagacaaccaacgttacataaaccgagtataatggctcataaagcacgt
gttctgaaaggagaaaagacattgcatcttcattatgcaaactgtaaggcgtataatgcg
gattttgatggcgatgagatgaacgctcattttccgcaaaacgaactagctagaagtgag
ggttataatatagctaatgtgtgcaatcaatatctcgtaccaaaagacggaactccgtta
agtggtcttatacaagattacataatagccggagtacaattaacaactaggggtcaattt
ttctcacaaacgcattatacacaattagtttatactgcactctcgatggtacaaggagat
gtaattctcttaccaccaactattatcaaaccaaagcctctatggtcaggtaaacaagtt
ctttcaactgttataattaatattattccttcggataagacacgaattaatctaatttct
aatgcaaagattaatgtaaaagaatggcaagtggaaacaccacgacgttggaaatgtgga
gtagaatttaaaaatccaataattatgtcagaagctgaagttgtaattcgacatggagaa
ttactatgtggagtgcttgataaaatgcactatggtgcgacttcttatggtcttattcat
tgtatttatgagctatatggggaaatgtatgcaagtaaaatattaagcgcatttgcaaaa
ttgttccaaacctttttacgatacaatggatttactctgggtgttgaagatattctaata
actcataaaattgacaaaaaacgtaaagaattaattcttgattgtcgaaaaatcggagaa
gatgtacaaaaatctatcataaaagtatctaatgaagtatctatggatgaatttaaagac
aaggtggaagaattttattggcataattcgaaatttcgtgcacaagtcgaccataaatat
aagagtgtattagacgtttacactaatgatattaatagaacgtgtctacagctaggactt
tttaagaaatttcccaagaataatttacagcttatggtacaatctggcgcaaaaggatcc
atggttaatactatgcaaatatcgtgtttgcttggtcaaagtgaattggaaggtaaaagg
ccaccattaatgatcagtggaaaaagtttatcaagtttctcagcgtatgatccgacacct
agagctggcggttttatcgatagtagatttatgactggaattaagtctcaggaatgtttt
ttccattgcatggcaggacgtgaaggtcttgttgatactgcagtcaaaactagtagatcc
ggatatttacaaagatgccttgtgaagcatctggaaggattagttatcggttatgatgcg
acagttagagattatgatggtagtttaattcaattttattatggagaggatggcctcgat
ataccgggttcacgattcttaagaaaagaacaaatggcatttttagccgataataaagat
gctattatagatacaaaattattggaatatctaaaaacagataacaaaaagattagaaaa
atgataaaaaagattaaaaaatgggaagataaaaatggttcttctttgaaaaagaagaga
attagtgaatttacgagattttctattgagaatcagaataacttaaaagaaaaaagaagc
attgataagtctaatggaagaagtaaagctgcattatctcttatgcgaaaatggataaga
acgaaggaagaagtgaaagagacatttcgcgcacaatgtgctaaatgtcccgatccagta
acatcaaaatatagacaagatattgaatttggtgtattaccagaacgaatagaaggttta
atagacgaatatgtttttcattctccaaaaattaaaaaatccatcctaagagatttgtta
tccatcaaaattatgaaaagcatttgtccacctggtgaaccagttggtttgttagcagca
caatctataggcgaaccatccactcaaatgaccttaaatacatttcatttttctggacgt
ggtgacatgaacgtgactctaggtattcctagattgcgtgaaattttaatgatagcatca
aagaatataaagactccaagtatggaaatacctttccagaacaatctgcaaaatcttgaa
aagcaagcaaagaaactaagattaaaattaacaaaatgtgtcctgcgtgatgtattgaaa
gatattacagtaagtagaacaatagaaaaaagtccatatagaaaattagtgtacactata
atgatcgaatatcttccttacaaatcttataaaaatgagttttccattcatcgacaagat
gtaattaagcgtactgagaaattttttttcaagaatatatttaaagaaatcgaaaaactt
actaaagcaagcaaagttttattgcattacgaaggagaaaaaagacaggcaagcaatgac
gatgcactagatcaatttgatcctgatgacataatgtcggaaaatactggacgaagaatg
cagatggatttaggagagatgcatgaatcatccgatgaggaagaaattgcagaggatgct
gatgcgacgatgagtagatccctatcgcgtcatcaagaaaatcaagaatatgaagattca
gaagaagaagtggaagatatcacaaattataaagaggaagaagcagataataataatata
aataaaaacttggaaaatacagaagataatgaagaggatgactatactaaggagaaatta
gataacagaaaaaatgacaaatataacagaaaaaaatgtgtcctagattcatatttgtat
gctactgattatgattatgacgaaagtaaattatcatggtgtaaattcacattttggtta
ccacttaaaatgattaaattagatttgccaacaataattaaaaatgctgcagacaaaact
gttttatgcgaaataccacatatcaagaaagcttttacttttcaaaatagtgaaaatgaa
acaattctcaaaacagatggtttaaatatagtagagatgttcaaatatgataaaatactt
aatttaaataggttatattctaatgatatctataatatttctttaacatacggaattgaa
gctgcaaataaagttattgtaagggaagtgagggatatctttaagatgtatggtattact
gtagactgtagacatctatccttaatcgctgattatatgacatttgatggaacattccaa
ccacttagtcggaaaggaatggaaaattctgcctcaccattacaacaaataagttttgaa
agctcgttagcttttttgaaaagtgcaacattgcaaggaaaaaaggacgatatattatca
ccttcaagtagactgatgttaggacaaccatgcaaatctggaactggagcattctctgta
ttaccatcattatacatgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (21)   

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