KEGG   Camponotus floridanus (Florida carpenter ant): 105252450
Entry
105252450         CDS       T03919                                 
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
  KO
K12580  CCR4-NOT transcription complex subunit 3
Organism
cfo  Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cfo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105252450
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cfo03019]
    105252450
Messenger RNA biogenesis [BR:cfo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105252450
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     105252450
SSDB
Motif
Pfam: Not3 NOT2_3_5_C
Other DBs
NCBI-GeneID: 105252450
NCBI-ProteinID: XP_011258109
Position
Unknown
AA seq 687 aa
MAATRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSTLLDYRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
KDEVTSWLANSIDALNLQMDTFESEIESLQAGKKKRIDKDKQDRVDELKTKLDKHRYHIR
KLETLLRMLDNMSVEVNTIKRIKDDVEYYIESSQDPDFEENEYIYDDIIGLDEVELSGVG
IPSSATTDSNNSNETGGTPTSTNSCTSPIPSPSLSSTMHNHSSDSSTDNDKKTKPVKPTA
VRPLLNTQASIPTTGSTATIKSNILSSSTPSKTIPMTPSHSSPSSTSNHIATTNAGNFAT
VAASHSSSQTIHPTSNKTSTHNNENSLLSSSSMSSITSIVPQTVTQQHNSNSAPVQTTHV
LHSQQSQNHNSETEMTTPIPPSSSPQSSVSSRSSPMPANSCSPAPSTANGLIPKLPDGNM
SSLKSIAQQVIVRAGLEIPPSEPNRNIFDSTKTNNNSGNNATSEAHIPPLLGVAPLGPVP
LQREHQLQFQMMEAAYCHMPHPSDSERLRSYLPRNTCTTPPYYQQVQLPHSDTVEFFQRL
STETLFFIFYYMEGSKGQYLAAKALKKQSWRFHTKYMMWFQRHEEPKVINEEYEQGTYIY
FDYEKWGQRKKEGFTFEYKYLEDRDLN
NT seq 2064 nt   +upstreamnt  +downstreamnt
atggctgcgacaagaaagttgcaaggtgaaatagatcggtgccttaaaaaagtaacagaa
ggtgtagaaacctttgaagatatttggcaaaaagttcataatgccaccaacagcaatcag
aaagaaaagtacgaggctgatctcaaaaaggaaattaagaaacttcaaaggttacgcgat
caaattaagagctggatcgcatcaggtgaaataaaagataagagtacattacttgactac
aggaagttgatcgaaactcaaatggaaagatttaaagttgtggaaagagagacaaaaaca
aaggcttactctaaagaaggtttgggtgcagctcaaaaattagacccagctcagaaagag
aaagacgaggttactagttggctcgccaattctatagacgctctcaatctgcagatggat
acatttgaatcggaaatagaatcgttacaggcgggaaagaagaagagaatagacaaggac
aagcaagatagggtagatgaattgaagacgaagctcgataagcatcgctatcatatccgt
aaattggaaacgttattacgtatgcttgacaatatgtccgtcgaagtcaatacaattaag
aggataaaggacgatgttgagtattatatcgaatcgtcgcaagatcctgattttgaagaa
aacgaatatatttatgatgatattatcggcctcgatgaagtcgaattgtccggggttggt
ataccctcgtcagcaacgacggatagtaacaatagcaacgaaaccggggggacgccgact
tcaactaattcctgtacttcgcctataccgtcaccatcattgagttcaactatgcataat
cattcgagcgacagttctacagataacgataagaaaacaaagcctgtgaaaccgacagca
gtcagaccgctactgaatacacaagcgagcattccaaccacgggaagcactgccaccata
aaatcgaacatattatcaagcagcactccgagcaaaaccattcccatgacgcctagccac
agctcgcctagttctacgagtaatcacattgccaccactaacgctggcaattttgccact
gtagctgcttcgcacagcagttcgcaaaccatccatcctacctctaataaaacatccacc
cacaacaacgagaatagcctcttgtcgtcatcgtctatgtccagcattacgtcgattgtg
ccgcaaacggttacgcaacagcataatagtaattcggcgccagtacaaacgacgcatgta
ctacacagtcagcagagtcagaatcacaatagtgaaacggaaatgaccacgccaataccg
ccgtcgtcatcgccacaatcatcggtcagcagtagatcctcgccgatgcctgcaaattcc
tgctcgccagcaccgtccactgccaatggtctcatccctaagcttcctgatgggaatatg
tcctctttaaaatccattgcccaacaagtaattgtccgagcaggtctcgagataccgcct
tccgagccgaatagaaacatctttgacagtactaagacaaataacaacagcggtaacaat
gctacgtcggaagcacacattcctccgctgcttggggtcgcgcctctggggcctgtacca
ttacagagagaacatcagttgcaattccaaatgatggaggccgcgtactgtcatatgcca
catccgtctgactcggaacgactacgttcgtatttgccgagaaatacgtgcactacacct
ccctattatcagcaggttcagcttcctcattcggataccgtggagttcttccaacgtctt
tctacagaaacattattcttcatattttattatatggaggggtctaaaggacaatatttg
gcggcgaaagctctaaagaagcaaagctggaggtttcacactaagtatatgatgtggttt
caaaggcacgaagaacctaaagttattaatgaggaatatgaacagggaacatacatttat
tttgactatgaaaaatggggacaaaggaaaaaagaaggatttactttcgagtataagtac
ttagaggacagagacttgaattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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