KEGG   Collimonas fungivorans: CFU_1958
Entry
CFU_1958          CDS       T01583                                 
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
  KO
K05591  ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
Organism
cfu  Collimonas fungivorans
Brite
KEGG Orthology (KO) [BR:cfu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cfu03009]
    CFU_1958 (dbpA)
Enzymes [BR:cfu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     CFU_1958 (dbpA)
Ribosome biogenesis [BR:cfu03009]
 Prokaryotic type
  rRNA helicases
   CFU_1958 (dbpA)
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII P-loop_SecA AAA_22 ERCC3_RAD25_C PAS_12
Other DBs
NCBI-ProteinID: AEK61789
UniProt: G0A8S6
Position
complement(2306937..2308316)
AA seq 459 aa
MKTSSFSTLPLAPALLSNLDSLGYHEMTTIQAQSLPVILERRDLIAQAKTGSGKTAAFGI
GILHKLNPSYFAIQALVLCPTRELADQVAKELRRLARFADNVKILTLCGGTPMGPQIGSL
EHGAHIIVGTPGRIRDHIGRGSINLGTVQTLVLDEADRMVDMGFYEEISGIVSACPARRQ
TLLFSATYPDDIRKASAEFLRDAVEVKVEAQHDTGRIEQRFYEVSYEGRNAAVAQLLNHY
KPVSTIAFCNTKIHCRELADELRAQGFSALALYGELEQRERDEILVRFANQSCSVLVATD
VAARGLDIQTLGAVINVDVSKDTEVHIHRVGRTGRGQDRGLALSLCAPNEKKWVKLIEDY
QQGPVSWFDLAALEPAAGEPLTAPMLTLCIMGGKKDKLRPGDLLGALTGDVGLSKEQVGK
ISVFEFVTYVALDKRIAKHAFGKLSNGNIKGKNFKMRFI
NT seq 1380 nt   +upstreamnt  +downstreamnt
gtgaaaacctcttctttctccaccctcccgctggcgccggcgttactcagcaacctggat
agcctcggctaccatgaaatgaccaccatccaggcgcagagcctgccggtgatcctcgag
cggcgcgacctgatcgcccaggccaagaccggcagcggcaagaccgcggctttcggcatc
ggcatcctgcacaagctcaaccccagctatttcgcgatccaggcgctggtgctgtgccct
acgcgcgagctggcggaccaggtcgccaaggaactgcggcggctggcgcgctttgccgac
aacgtcaagatcctgaccttgtgcggcggcacgccgatgggcccgcagatcggttcgctg
gagcatggcgcgcatatcatcgtcggcaccccgggacgcatccgcgaccacatcggccgc
ggcagcatcaacctcggcaccgtgcagacgctggtgctggacgaagccgaccgcatggtc
gacatggggttctacgaagaaatctcgggcatcgtcagcgcctgcccggcgcgccgccag
accttgctgttttccgccacgtatccggacgacatccgcaaggccagcgccgaattcctg
cgcgacgcggtcgaggtcaaggtcgaagcgcagcatgataccggccgcatcgaacagcgc
ttttacgaagtctcctacgaaggccgcaatgccgccgtggcgcagctgctgaaccactac
aagccggtctcgaccatcgccttttgcaacaccaagatccattgccgcgaactggccgac
gaattgcgcgcgcagggtttcagcgcgctggcgctgtacggcgagctggagcagcgcgag
cgcgatgagatcctggtgcgcttcgccaaccagagctgctcggtgctggtggccaccgac
gtcgccgcccgcggcctggacatccagaccctgggcgcggtcatcaatgtcgacgtttcc
aaggacaccgaagtccacatccaccgcgtcggccgcaccggccgcggccaggaccggggg
ctggcgctgagcttgtgcgcgccgaacgaaaagaaatgggtcaagctgatcgaggactat
cagcaaggaccggtcagctggttcgacctggcggcgctggaaccggcagcgggcgaaccg
ctgaccgcgcccatgctgacgctgtgcatcatgggcggcaagaaagacaagctgcgcccg
ggcgacttgctgggagcgctgaccggcgatgtcggcctgagcaaggaacaggtcggcaag
atcagcgtgttcgaattcgtcacctatgtggcgctcgacaaacggatcgccaagcacgcg
ttcggcaagctgagcaacggcaatatcaagggcaagaacttcaagatgcggttcatctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (22)   

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