KEGG   Cystobacter fuscus: CYFUS_002770
Entry
CYFUS_002770      CDS       T05065                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
cfus  Cystobacter fuscus
Pathway
cfus03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cfus00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CYFUS_002770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cfus03021]
    CYFUS_002770
   03019 Messenger RNA biogenesis [BR:cfus03019]
    CYFUS_002770
Transcription machinery [BR:cfus03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     CYFUS_002770
Messenger RNA biogenesis [BR:cfus03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     CYFUS_002770
SSDB
Motif
Pfam: ATP-synt_ab AAA_25 Rho_RNA_bind AAA_22 ANAPC_CDC26 AAA NACHT TFIIA
Other DBs
NCBI-ProteinID: ATB37348
UniProt: A0A250J1G5
Position
complement(3383680..3385206)
AA seq 508 aa
MSETDNRDPSELPSPMAAHADAPDVDDGDDEGDEGPDEGEGSASPGQPAGAAPGPGGRRR
RRRRRRRGAQVLFTPEGQAYRMVAGPDGQPQQVFLTPQELQQYQQRLAQQQQQAQHHGQQ
APQHAPQHHGERQQRPPQVAAQPSLAPVEGVLDTEAKGPNAYLRQLKRNLLPSPDDAEIP
KNLVQKLRLRPGQYLHAFAQMKGPKGIVQRVEQADGRPLDLMSRLPHFADLTSVDPVDRI
KLENGHREMVTRVLDLISPIGKGQRALIVAPPKTGKTIMLQRIAQAVVANHPEIHLMVLL
IDERPEEVTDMRRNIKAEVLASSSDRPTGDHLKIAELALERARRLVEGGKDVMILLDSIT
RLARAYNKEVDNSGRTLSGGVDSRALERPKRIFGAARATEEAGSLTIVGTALIDTGSRMD
EVIFEEFKGTGNSEVTLDRFLAEKRIFPAVNIGQSGTRKEEKLFGHKEYEKVKKMRQMLF
AVKPVEAMEALVKRLSRYTYNDEFLEEL
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgagcgaaaccgataaccgcgatccctccgagctcccctcccccatggccgcccacgcc
gatgcaccggacgtggatgacggtgatgacgagggcgacgagggacccgatgaaggcgag
ggctcggcctcgcctggacagcccgcgggcgccgcgcccggaccgggaggccgccgccgc
cgtcgccgccgccgccgccggggagcccaggtgctcttcacccccgaaggacaggcctac
cgcatggtggccggtccggacggtcagccccagcaggtgttcctcacgccgcaggaactg
cagcagtaccagcagcgcctggcgcagcagcaacagcaggcccagcaccacgggcagcag
gcgccccagcacgcgccgcagcaccatggggagcggcagcagaggcccccgcaggtggcc
gcccagccctcgctcgccccggtggaaggggtgctcgacaccgaggccaaggggcccaac
gcctatctgcgccagctcaagcgcaacctgctgccctctccggatgacgcggagattccc
aagaacctggtgcagaagctgcgcttgcgcccggggcagtacctgcatgccttcgcccag
atgaagggccccaagggcatcgtccagcgcgtggagcaggcggatggccgcccgttggac
ctgatgagccgcctgccgcacttcgccgacctcacgtccgtggatccggtggaccgcatc
aagctggagaatggccatcgggagatggtgacgcgggtgttggatctcatctcgcccatc
ggcaaggggcagcgcgcgctcatcgtggcaccgcccaagacgggcaagaccatcatgctg
cagcgcattgcccaggcggtggtggccaaccatccggaaatccacctcatggtgctgctc
atcgacgagcgccccgaggaggtgacggacatgcgccgcaacatcaaggccgaggtgctg
gcgtccagctcggaccggcccacgggcgatcacctgaagatcgccgagctggcgctggag
cgggcacggcgcctggtggagggaggcaaggacgtgatgatcctcctggactccatcacc
cggctggcgcgcgcctacaacaaggaagtggacaactcgggacgcacgctgtcgggcggc
gtggacagccgcgcgctggagcgccccaagcgcatcttcggcgcggcgcgcgccaccgag
gaggcgggcagcctcaccatcgtgggcacggcgctcatcgacaccggcagccgcatggac
gaggtcatcttcgaggagttcaagggcacgggtaactccgaggtcaccctggaccggttc
ctggcggagaagcgcatcttcccggcggtcaacatcggccagtcgggcacgcgcaaggaa
gagaagctcttcggccacaaggaatacgagaaggtgaagaagatgcgccagatgctcttc
gcggtgaagcccgtggaggccatggaggcgctcgtcaagcggctcagccgctacacctac
aacgacgagttcctcgaggagttgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (33)   

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