KEGG   Cricetulus griseus (Chinese hamster): 100765378
Entry
100765378         CDS       T02813                                 
Symbol
Itgb5
Name
(RefSeq) integrin beta-5 isoform X3
  KO
K06588  integrin beta 5
Organism
cge  Cricetulus griseus (Chinese hamster)
Pathway
cge04145  Phagosome
cge04148  Efferocytosis
cge04151  PI3K-Akt signaling pathway
cge04510  Focal adhesion
cge04512  ECM-receptor interaction
cge04810  Regulation of actin cytoskeleton
cge04820  Cytoskeleton in muscle cells
cge05165  Human papillomavirus infection
cge05205  Proteoglycans in cancer
cge05410  Hypertrophic cardiomyopathy
cge05412  Arrhythmogenic right ventricular cardiomyopathy
cge05414  Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:cge00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    100765378 (Itgb5)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    100765378 (Itgb5)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100765378 (Itgb5)
   04148 Efferocytosis
    100765378 (Itgb5)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100765378 (Itgb5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100765378 (Itgb5)
   04810 Regulation of actin cytoskeleton
    100765378 (Itgb5)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    100765378 (Itgb5)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    100765378 (Itgb5)
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    100765378 (Itgb5)
   05412 Arrhythmogenic right ventricular cardiomyopathy
    100765378 (Itgb5)
   05414 Dilated cardiomyopathy
    100765378 (Itgb5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cge04131]
    100765378 (Itgb5)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cge04515]
    100765378 (Itgb5)
Membrane trafficking [BR:cge04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    100765378 (Itgb5)
Cell adhesion molecules [BR:cge04515]
 Integrins
  Integrin beta subunits
   100765378 (Itgb5)
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt PSI_integrin EGF_2 I-EGF_1 SCO4226-like
Other DBs
NCBI-GeneID: 100765378
NCBI-ProteinID: XP_027268595
UniProt: A0A9J7FUA6
Position
4:complement(55644710..55766169)
AA seq 822 aa
MRLRSRPRPAPSPPRAPRRAARTMPRVPATLYACLLGLCALVPRLAGLNICTSGSATSCE
ECLLIHPKCAWCSKEYFGNPRSVTSRCDLKANLIRNGCGGEIESPASSTHVLRSLPLSSK
GSSVMGSDVIQMTPQEISVSLRPGDQTAFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDNI
RSLGTKLAEEMRKLTSNFRLGFGSFVDKDISPFSYTAPRYETNPCIGYKLFPNCVPSFGF
RHLLPLTDRVDSFNEEVRKQRVSRNRDAPEGGFDAVLQAAVCKEKIGWRKDALHLLVFTT
DDVPHIALDGKLGGLVQPHDGQCHLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAV
TKNHYMLYKNFTALIPGTTVEILHGDSKNIIQLIINAYSSIRSKVELSVWDQPEDLNLFF
TATCQDGVSYPGQRKCEGLKIGDTASFEVSVEARSCPGKHTAQSFTLRPVGFRDSLQVEV
TYNCTCGCSRGQEPNSARCSGNGTYICGLCECDPSYLGTRCECQEGENQSGYQNLCREAE
GKPLCSGRGECSCNQCSCFESEFGRIYGPFCECDSFSCARNKGVLCSGHGECHCGECKCH
AGYIGDNCNCSTDISTCRAKDGQICSDRGRCVCGQCQCTEPGAFGETCEKCPTCPDACSS
KRDCVECLLLHLGKPDNQTCHHQCKEEVVTWVDTIVKDDQEAVLCFYKTAKDCVMMFSYT
DLPNGRSNLTVLREPECASAPNAMTILLAVVGSILLIGMALLAIWKLLVTIHDRREFAKF
QSERSRARYEMASNPLYRKPISTHTVDFAFNKFNKSYNGSVD
NT seq 2469 nt   +upstreamnt  +downstreamnt
atgcggctgcggtcccggcctcgccccgctccgtccccgccgcgcgccccccgccgagcg
gcgcgcaccatgccgcgggtgcccgcgaccctctacgcctgtctgctcgggctctgcgcg
ctcgtgccgcgcctcgcagggctcaacatttgcactagtggaagtgccacctcatgtgag
gaatgtctattaattcaccccaaatgtgcctggtgctccaaagagtactttggcaatcca
cggtccgtcacctctcggtgtgacttgaaggcaaacctcatccgaaatggctgtggaggt
gagattgagagtccagccagcagcacccatgtccttcggagcctaccccttagcagcaag
ggctccagtgtcatgggctctgacgtcatccagatgacaccacaggagatttcggtgagc
ctcaggccaggcgaccagacagccttccagcttcaggtgcgccaggtggaggactacccc
gtagacctgtactacctgatggacctttccctctccatgaaggatgacttggacaacatc
cggagcctgggcaccaagcttgctgaggaaatgagaaagctcactagtaacttccggttg
ggtttcgggtcttttgttgacaaggacatctctcctttctcctacacggcaccgagatac
gagaccaatccatgtattggttacaagttattcccaaactgtgtcccttccttcgggttc
cgccatctgctgcctctcacggacagagtcgacagtttcaacgaggaagtaaggaagcag
agggtgtcccgtaaccgtgatgcccctgaagggggctttgatgctgtcctccaggcagct
gtttgcaaggagaagattggttggcgaaaagatgctttgcacttgctggtgttcacaacg
gatgatgtgccccacatcgcgctggatggaaaactgggtggcctggttcagccacacgat
ggccagtgtcacctgaatgaagccaatgaatacactgcgtccaaccagatggactatcca
tcgcttgccttgcttggggagaaactggcggagaacaatatcaacctcatcttcgctgtg
acgaagaaccactatatgctctacaagaattttacagccctgatacctggaaccactgtg
gagattttgcatggagactccaaaaatattattcaactgattatcaatgcatacagtagc
atccggtctaaagtggagctatcagtctgggatcaaccggaagaccttaatctcttcttc
accgcgacctgccaagatggtgtatcctaccctggtcagaggaagtgtgagggtctgaag
attggggacacggcatcctttgaagtgtccgtggaggctcggagctgccctggcaaacac
acagctcaatctttcaccctgcgccctgtgggcttccgggacagcctgcaggtggaagtc
acctacaactgcacatgtggctgtagcagaggacaggagcccaacagtgccaggtgcagt
gggaacggaacatacatctgcgggctctgtgaatgtgaccccagttacctgggcaccaga
tgcgagtgccaggagggggagaaccagagcgggtaccagaacctgtgccgagaggcagaa
ggcaagcctctatgcagtggacgcggggagtgcagctgcaaccagtgctcctgcttcgag
agtgagttcggaaggatctacgggcccttctgcgagtgtgacagcttttcctgcgccagg
aacaagggcgtcctatgctcaggccacggcgagtgtcactgtggagaatgcaaatgccat
gcaggttacattggggacaattgtaactgttcaacggacatcagcacatgccgggccaag
gatggacagatctgcagtgaccgtggccgctgtgtctgtgggcagtgccagtgtacagag
cctggagcctttggagaaacatgtgagaagtgcccaacctgcccagatgcttgcagctcc
aagagagactgtgtagaatgcttgctgcttcacttggggaaacctgacaaccagacctgc
caccaccagtgcaaagaggaggtggtcacgtgggtagacaccattgtcaaagatgaccag
gaggctgtgctttgcttctacaaaactgctaaggactgcgtcatgatgttcagctacaca
gacctgcccaatgggaggtccaacctgacagtcctcagggagccagagtgtgcaagtgcc
cccaatgctatgaccatcctgctggctgtggttggcagcatccttctgattgggatggca
ctcctggccatctggaaactgcttgtcaccatccatgaccgccgagagtttgccaagttc
cagagtgagcgttccagggcacgctatgaaatggcttccaaccccctgtacagaaaaccc
atctccacacacaccgtagatttcgccttcaacaagttcaacaaatcctacaacggctca
gtggactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (12)   
   KEGG PATHWAY (12)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (53)   

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