KEGG   Corynebacterium glyciniphilum: CGLY_09405
Entry
CGLY_09405        CDS       T03073                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
cgy  Corynebacterium glyciniphilum
Pathway
cgy03030  DNA replication
cgy03410  Base excision repair
cgy03420  Nucleotide excision repair
cgy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cgy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CGLY_09405 (polA)
   03410 Base excision repair
    CGLY_09405 (polA)
   03420 Nucleotide excision repair
    CGLY_09405 (polA)
   03440 Homologous recombination
    CGLY_09405 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cgy03032]
    CGLY_09405 (polA)
   03400 DNA repair and recombination proteins [BR:cgy03400]
    CGLY_09405 (polA)
Enzymes [BR:cgy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CGLY_09405 (polA)
DNA replication proteins [BR:cgy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CGLY_09405 (polA)
DNA repair and recombination proteins [BR:cgy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     CGLY_09405 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CGLY_09405 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_lambd_f HHH_5 HHH_2 HHH RecR_HhH
Other DBs
NCBI-ProteinID: AHW64326
UniProt: X5ECL8
Position
complement(2020111..2022819)
AA seq 902 aa
MTDNSGDGRPTLLLLDGHSLAFRAFYALPAQNFSTTGGQYTNAVYGFLGMFLGLVETEKP
THIAAAFDLSGPTFREKDLPAYKAQRPPAPDEFRGQVELIQEALQALGIQTLTKESYEAD
DIIATLSCRGTDAGMRTVICTGDRDSLQLVNDDVTVLYTLRGVSELDRFTPARVEEKYGV
TPTQYPDLASLRGDTSDNMPGVPGVGPKTAQKWISKYGSLDAVIEHIDDFGGKVGESLRD
NIDNVILARKVTEMVRDLELGDLDGEGGPLSALRPAAVDASEAGSLFDSLQFGANLRNRT
FRVMGIEFEDGAAAELAVDDLADGKLAKWLADRAGWKDGRSHGDASVNRPLVVEVSGEGA
PFGGHAEHVVLLDPVAGEDGVLHALQIDLADQDPKDEKALLGYLADTSAAKWLHDSKRSW
HMLNGTGIELDGVEHDTALAAYLLRPDVRSTGLADVLQRHVGHELAEGASAVARAQAVLE
LVTSLTPELTGIGAMELYLDLEVPLATILARMESYGISVDCPALQDLSDNYAERISDEVT
AARQLAGDESLNLSSPKQLQKVLFEDFGLPTTKKTKTGYSTAAGELEKLTEQTGHPFLGH
LMAHREYQKMKTTIDGLIDATADDGRIHTTFNQRGAATGRLSSAEPNLQNIPVRTEAGRH
IRGAFQVGSGYTTLLTADYSQIEMRVMAHLSQDPGLIEAYRQGEDLHNFVGSKVFDVPVD
DVTPELRRRVKAMSYGLVYGLSAFGLSQQLNIAAGEAKKIMDTYFERFGGVKKYLDEVVE
QAREDGYTETLYGRRRYLPELNSTNRVARDNAERAALNAPIQGTAADIIKRAMVRVDREM
TRRGMASRVLLQVHDELVVEVVDGELEEMTALLQEQMDGAAELRVPLDVSTGTGANWEAA
GH
NT seq 2709 nt   +upstreamnt  +downstreamnt
atgacagacaattccggggacgggcgtcccaccctcctgttactcgacgggcattcactg
gcgttccgggcgttctacgcactgccggcccagaatttctccacgaccggggggcagtac
accaatgctgtgtacgggttcctcggcatgttcctcggactagtcgaaacggagaagccg
acacatatcgcggcggcgttcgatctttcgggaccgacgttccgtgagaaggacctgcct
gcctacaaggcccagcggccaccggcaccggatgagttccgtggccaggtcgagttgatc
caggaggcgctccaggcactgggcattcagacactgaccaaggagtcctacgaagcggac
gacatcatcgccacgctgtcctgccgtggcaccgacgcgggcatgcgtacggtgatctgc
accggcgaccgggacagcctccagctcgtcaacgacgacgtcacggtgctctacactctt
cgtggagtctcggagctcgaccggtttaccccggcccgggtggaggagaagtacggtgtc
acaccgacgcagtaccctgacctcgcttcgctgcgtggagacacctccgacaacatgccc
ggggttcccggtgtcggcccgaagacagctcagaaatggatcagcaagtacggcagtctg
gatgccgtcatcgagcacatcgacgacttcggaggcaaagtcggagaatcactccgggac
aacatcgacaatgtgatcctcgcacggaaggtcacggagatggtccgagacctcgagctc
ggtgacctcgacggcgagggtggcccgctgtcagcgctgcgacctgctgctgtcgatgcc
tccgaggcgggcagcctcttcgactcactgcagttcggtgccaacctgcgtaaccggaca
ttccgggtgatgggtatcgagtttgaggatggcgcagcagctgaacttgccgtcgacgat
cttgccgacgggaaactggccaaatggctggccgaccgcgccgggtggaaggacggacgg
agccacggcgatgcgtcggtcaaccggccactggtcgtcgaggtcagtggcgagggggcg
cctttcggggggcacgctgagcatgtcgtcctgcttgatccggtggccggagaggacggg
gttctccacgccctgcagatcgatctggcggaccaggacccgaaggacgagaaggcgtta
ctggggtaccttgctgatacctctgcggcgaaatggctgcatgattccaagcggtcctgg
cacatgctcaacgggacggggatagagctcgacggcgtcgagcatgacaccgctcttgcc
gcctaccttctgcgtccggacgtccgttccaccggtctcgccgatgtgctgcaacgccac
gtcgggcacgagctcgccgagggagcatcggcagtcgcacgggcccaggccgtgcttgaa
cttgttacctccctcaccccggaacttaccggcatcggggcgatggagctctacctggat
ctcgaagtccctctggcgacgattctggccaggatggagagctacgggatctcggtcgac
tgccctgcgttgcaggacctttcggacaactacgcagaacgcatctccgacgaggtcacc
gccgcccgccagctggcgggcgacgagtcgctcaatctgtccagcccgaagcagttgcag
aaggtcctcttcgaggacttcggcctgcccaccacgaagaagaccaagaccggctattcc
accgcggcaggtgagttggagaagctgacggagcagaccgggcatccgttcctcggccat
ctcatggcccaccgcgagtatcagaagatgaagaccactattgacgggctcatcgatgcg
acggcggatgacgggcggattcatacgactttcaaccagcgcggtgcggcgacgggacgt
ctgtcctcagccgaacccaacctgcagaacattccggtccgcaccgaggcgggacgccat
atccgtggtgcgttccaggtggggtcggggtacaccacgttgttgacggcggactactcc
cagatcgagatgcgtgtgatggcgcacctctcccaggaccccgggctcatcgaggcctac
cgacagggcgaggacctgcacaatttcgtcggctcgaaggtcttcgacgtcccggtagac
gacgtcaccccggaactgcgtcgacgggtcaaggcgatgagctacgggttggtctatggt
ctgagtgctttcggcctgtcccagcagttgaatattgccgccggcgaggcgaagaagatc
atggacacctacttcgaacgcttcggcggggtcaagaagtatctcgacgaggtggtggaa
caggcacgggaggacggctacaccgagacgctttacgggcgtcggcggtaccttcccgag
ctcaactccaccaaccgggtcgcccgggacaacgccgagcgtgccgccctcaatgctccg
atccagggcaccgcagccgacatcatcaaacgcgcgatggtgcgggtggatcgggagatg
accagacgaggcatggcgtcgcgggtactgctgcaggtccacgacgaactggtcgtcgaa
gtcgttgacggggagctcgaggagatgacggcgttgctccaggaacagatggacggtgcc
gctgaactcagggttcctctggatgtgtcgaccggtacaggcgcgaactgggaggccgcc
gggcactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (22)   

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