KEGG T04040: AL346

Chelatococcus sp. CO-6: AL346_24015

Entry

AL346_24015       CDS       T04040

Name

(GenBank) RNA polymerase subunit sigma-24

K03088

RNA polymerase sigma-70 factor, ECF subfamily

Organism

chel Chelatococcus sp. CO-6

Brite

KEGG Orthology (KO) [BR:chel00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:chel03021]
    AL346_24015
Transcription machinery [BR:chel03021]
Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AL346_24015

SSDB

Motif

Pfam:

Sigma70_r2 Sigma70_r4_2 Sigma70_r4 FAN1_HTH Rv2175c_wHTH

Other DBs

NCBI-ProteinID:

ALA20460

Position

pCO-6:complement(752517..753137)

AA seq 206 aa
MERGQARDAAETPGQGEDERLLARIAAGEQAALVRLIDRHGRGLRLFAMRYLGSADDAED
AVQDVFVTVWKRAGRFDPARGRATTWLYRITTNRCIDMRRWRSLRVFVGLDEVAETLPAT
GVDADIRLSARQELAAVRQGLARLPERQRMALLLRAVADLDVPAIAEVMGSSTGSVEQLL
VRARRTLRERTTDVSADNKQEEGTLR

NT seq 621 nt +upstreamnt +downstreamnt
gtggagcgggggcaggcgcgcgatgccgcggaaacgccgggacagggcgaggacgagcgc
ctgctcgcccgcatcgcggctggtgagcaggcggcgctcgtccggctcatcgaccgccat
ggacgcggccttcgcctcttcgccatgcgctatctcggcagcgcggacgacgccgaggac
gcggtgcaggacgtgttcgtcacggtgtggaaacgcgctgggcggttcgaccccgcaagg
gggcgggcgacgacctggctctaccggatcacaaccaaccgctgcatcgacatgcgccgg
tggcgcagcctgcgcgtcttcgtcggcctcgacgaggtggcggagacgctgccggcgacc
ggcgtcgacgccgacatccgcctgtcggcgcggcaggagctcgcggcagtgcgccaaggc
ctcgcgcgcctgcccgagcgccagcgcatggcgctgctgctgcgggccgtggccgacctc
gacgtcccggccatcgccgaggtcatgggatcgagcacgggctcggtcgagcaactgctc
gtgcgggcgcggcgcacgctgcgcgaacgcacgacggacgtgagcgcagacaacaaacaa
gaagaagggacgttgcgatga

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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