KEGG   Capra hircus (goat): 102173564
Entry
102173564         CDS       T02910                                 
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X2
  KO
K00801  farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
Organism
chx  Capra hircus (goat)
Pathway
chx00100  Steroid biosynthesis
chx01100  Metabolic pathways
Module
chx_M00101  Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:chx00001]
 09100 Metabolism
  09103 Lipid metabolism
   00100 Steroid biosynthesis
    102173564 (FDFT1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:chx01006]
    102173564 (FDFT1)
Enzymes [BR:chx01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.21  squalene synthase
     102173564 (FDFT1)
Prenyltransferases [BR:chx01006]
 Terpene biosynthesis
  Squalene/phytoene synthase
   102173564 (FDFT1)
SSDB
Motif
Pfam: SQS_PSY Octopine_DH HAUS4
Other DBs
NCBI-GeneID: 102173564
NCBI-ProteinID: XP_005683583
EnsemblRapid: ENSCHIG00000024342
UniProt: A0A452FY30
Position
8:complement(7451908..7479982)
AA seq 417 aa
MEFVKCLGHPEEFYNLLRFQMGGRRKVIPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQA
LDGEMRHAVCIFYLVLRALDTLEDDMTISIERKVPLLHNFHSYLYEPDWRFTESKEKDRQ
VLEDFPTISLEFRNLAKKYQTVIVDVCQKMGFGMAEFLDKRVTSEREWDKYCHYVAGLVG
IGLSRLFSASELEDPLIGEDTERANSMGLFLQKTNIIRDYLEDQREGREFWPQETWSKYV
KKLGDFAKPENIDFAVQCLNELITNALHHIPDVITYLSRLRNQSIFNFCAIPQVMAIATL
AACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIHQYMEEIYHRIPTSDPCSTKTR
QIISTIRTQNLPNCQLVSRSHYSPIYLSFVMLLAALSWQYLSTLSQVTEDYVQTGEH
NT seq 1254 nt   +upstreamnt  +downstreamnt
atggagttcgtgaagtgcttggggcaccctgaggagttctacaaccttctgcgcttccag
atggggggccggcggaaggtgatacccaaaatggaccaggactcgctcagcagcagcttg
aaaacttgctacaagtacctgaatcagaccagtcgcagtttcgcagctgttatccaggcg
ctggatggagaaatgcgccacgcagtatgcatattttatctggttctccgagctttggac
acgctggaagatgacatgaccatcagcatagaaagaaaagtgccactgctacacaacttc
cactcatacctctatgagcctgactggcggttcacggagagcaaggaaaaggaccggcaa
gtcctggaggactttccaacgatctccctggagtttcgaaatctggctaagaaatatcaa
acagtgattgttgacgtttgccagaagatgggctttgggatggcagagtttctggataag
cgcgtgacgtctgaacgggagtgggacaagtactgtcactatgttgctgggctagtggga
attggcctctcccgtctcttctcggcctcagagttagaagaccccttaattggtgaagac
acagagcgagccaactctatgggccttttcctgcagaaaacaaacatcatccgtgattat
ctggaagaccagcgagaaggaagagagttttggcctcaggagacttggagcaagtatgtg
aagaagctgggtgactttgctaagccagagaacatcgacttcgctgtgcagtgtctgaac
gaactcatcaccaacgcactgcaccacatccccgacgtcatcacctacctgtcacgactt
agaaaccagagtatatttaacttctgtgctattccacaggtcatggccattgctactttg
gctgcctgttacaataatcagcaggtgttcaagggggtggtgaagattcggaaagggcaa
gcggtcaccctgatgatggatgccaccaacatgccagctgtaaaagccataatacaccag
tacatggaagagatttatcacagaattcccacctctgacccctgctccactaaaacacgg
cagatcatctccaccatcaggacacagaatctccccaactgtcagctggtctcacggagc
cactactcgcccatctacctgtcattcgtcatgctcctggcggccctgagctggcagtac
ctgagcaccctgtcccaggtcacagaggactacgttcagacgggggagcactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (2)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (36)   

Download RDF
DBGET integrated database retrieval system