KEGG   Citrus x clementina (clementine): CICLE_v10011157mg
Entry
CICLE_v10011157mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K03869  cullin 3
Organism
cic  Citrus x clementina (clementine)
Pathway
cic04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cic00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    CICLE_v10011157mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cic04121]
    CICLE_v10011157mg
   03400 DNA repair and recombination proteins [BR:cic03400]
    CICLE_v10011157mg
Ubiquitin system [BR:cic04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul3 complex
    Cullin
     CICLE_v10011157mg
DNA repair and recombination proteins [BR:cic03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     CICLE_v10011157mg
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 WAC_Acf1_DNA_bd Phage_antitermQ
Other DBs
NCBI-GeneID: 18040033
NCBI-ProteinID: XP_006431127
UniProt: V4SUE6
Position
Unknown
AA seq 733 aa
MSAPKKRTFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMV
LHKFGEKLYSGLVTTMTFHLTEICKSIEAAQGGLFLEELNRKWADHNKALQMIRDILMYM
DRTFIPSTHKTPVHELGLNLWRDVVIHSSKIQTRLQDTLLELVQRERSGEVINRGLMRNI
TKMLMDLGSFVYQDDFEKHFLEVSADFYRLESQEFIESCDCGDYLKKAERRLNEEMERVS
HYLDARSEAKITNVVEKEMIESHMNRLVHMENSGLVNMLVDDKYEDLGRMYCLFRRVPSG
LILIRDVMTSYIRDTGKQLVSDPERLKDPVDFVQRLLDLKDKYDKVINSAFNNDKTFQNA
LNSSFEYFINLNSRSPEFISLFVDDKLRKGLRGVSEEDVENVLDKVMMLFRFLQEKDVFE
KYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFYA
SLGAESGDSPTLTVQVLTTGSWPTQPSATCNLPAEIMGICEKFRSYYLGTHTGRRLTWQT
NMGTADLKGTFGKGQKHELNVSTYQMCVLMLFNSVDRLSYKEIEQATEIPAPELKRCLQS
LACVKGKHVLRKEPMSKDIAEDDAFFFNDKFTSKFVKVKIGTVVAQRESEPENQETRQRV
EEDRKPQIEAAIVRIMKARRVLDHNNIVTEVTKQLQSRFLPNPVVIKKRIESLIEREFLE
RDKVDRKLYRYLA
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgagtgctccgaagaagaggactttccaaatagaggcgtttaagcaccgggtcgtggtg
gatccaaaatacgcagagaagacatggaagattttggagcatgcgattcatgagatttac
aatcataacgccagtgggcttagctttgaggagctttataggaatgcctacaacatggtg
ctgcacaaatttggtgagaaactttactctggacttgtgacaacaatgacttttcatctc
acagaaatatgcaaatcaattgaagctgctcaggggggtctatttttggaagagctgaac
aggaaatgggcagatcataacaaggctttgcaaatgatccgggacatattgatgtacatg
gataggacattcatcccaagcacccataaaacccctgtacatgagctagggttaaatctg
tggagggatgttgttatacactccagcaaaatccagactaggctacaggatacacttctt
gaacttgtgcagagagaaaggagtggtgaagttataaacaggggcttgatgagaaacatt
acaaaaatgctgatggatttaggttcttttgtttaccaggatgactttgagaagcatttc
ctcgaagtctcagctgatttttaccgtctcgagtctcaagagtttattgagtcctgtgat
tgtggagattatcttaagaaagctgaaagacgtctaaatgaagaaatggagagagtttct
cattacttggatgctaggagtgaagccaaaataactaatgtcgtcgagaaggagatgatt
gaaagtcacatgaacagactagttcatatggagaactcgggcttggttaatatgcttgtg
gatgacaaatatgaggacttgggaaggatgtactgcttgtttcgtcgggtacctagtgga
cttattttaataagagatgtcatgacttcatacattcgggataccggtaagcagctggtt
agcgatccagaaagattaaaggatcctgtagatttcgttcaacgccttttggatttaaag
gataaatatgacaaagttatcaattcagcatttaataatgacaagacctttcaaaatgct
ttaaattcatcttttgaatacttcattaacttgaactctcggtctccggaatttatttca
ttgtttgtggatgacaagctccgaaaaggactaagaggggttagtgaggaggatgtggag
aatgtgcttgacaaggtcatgatgcttttccgtttccttcaggagaaagatgtatttgag
aagtattacaagcaacaccttgccaagaggcttctttctgggaaaacagtctctgatgat
gcagaaagaagtttgatcgttaaactcaaaacagagtgcggatatcagtttacttcgaaa
ttggagggtatgttcactgacatgaagacatctcaggatacaatgcagggattctatgcc
agcctgggtgctgagtcgggggattcccccacactaactgtccaggttctcactacaggt
tcttggccaactcaaccaagtgctacatgcaatcttcctgcagaaatcatgggaatatgt
gagaaattccgtagttattatcttgggacacatactggacgaagattgacttggcaaacc
aatatgggcacagctgatttgaagggaacttttggaaaaggccagaaacatgagctgaat
gtttcaacttaccagatgtgtgtactgatgctattcaatagcgttgatcggttgagttac
aaagaaattgagcaggccacagaaatacctgccccagaattgaagaggtgcctgcagtcg
ctggcctgtgtcaagggtaagcatgttcttaggaaggaacccatgagcaaagacatagct
gaagatgatgccttcttcttcaacgacaagttcacaagcaagttcgttaaggttaagata
ggtacagtggttgcacaaagagagtctgaaccggaaaatcaggaaaccagacaaagagtg
gaggaagacaggaaaccccagatagaggcagcgattgtaaggatcatgaaggcaagacgg
gtgctggatcacaataacattgttactgaagtcacaaagcagctgcaatctcggtttctg
ccgaatccagttgtaattaaaaaaagaatagagtccctaatcgaaagggagtttctagag
agggacaaagtggacaggaaattgtaccgataccttgcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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