KEGG   Citrus x clementina (clementine): CICLE_v10014025mg
Entry
CICLE_v10014025mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K10846  DNA excision repair protein ERCC-5
Organism
cic  Citrus x clementina (clementine)
Pathway
cic03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CICLE_v10014025mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cic03400]
    CICLE_v10014025mg
DNA repair and recombination proteins [BR:cic03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     CICLE_v10014025mg
SSDB
Motif
Pfam: XPG_N XPG_I UBM XPG_I_2
Other DBs
NCBI-GeneID: 18050576
NCBI-ProteinID: XP_006446452
UniProt: V4U1F1
Position
Unknown
AA seq 1699 aa
MGVHGLWDLLAPVGRRVSVETLSGKKLAIDASIWMIQFMKAMRDEKGEMVRNAHLIGFFR
RICKLLYLKTKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLINHLKTMRLK
ELALDLENQRQIQKRDPEGKKVLSDMENCSERTDGVSASDDKENLDEMLAASIAAEANES
SSKSASKSATANLLEEDGDEDEEIMLPTMGGNVDPAVFAALPPSMQHQLLVRNNDAKGKN
VLSDDLGQADTVGISPESHDGVSKSRDHKMLDEMLAASIAAEEDGSLSNNASASAASLPL
EEEDGDEDEEMILPAMTGNVDPAVLAALPPSMQLDLLVQMREQLMAENRQKYQKVKKAPE
KFSELQIQAYLKTVAFRREIDEVQKAAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQV
LTSSRVEGKKDEQQQIPSEHPVSDSVNNGASIDKSNFSSTDQSNSVTKLGPGESRKSFAD
DVETYLDERGRVRLSKVRAMGIRMTRDLQRNLAMMKEIEQDRPNGNNITGAGSMLTLNET
GTSNAVPSEKSKFIGTSLDDTNESVSSIERNKQSTLKSGISLELSFKDNSENNCDDDDDI
FAHLAAGKPVIFPNSPRAHSSISVSDSDWEEGTTERKGSSLSDDANAGINPPLNLEEGGI
SDESEVEWEEGPSCAPKSSLSFPAESEKTVSNIEEEANLQEAIRRSLLDVCIEKPNYALS
EHNKCENLGENACDGTWLYDRENNMDDPNFLGESVSQQHESICEYVDGLGKLDTVGGINN
SEVIGSLGRELKLYEPRNSDEKEMLINKPFEKDNSYFEQSRQGANDGANDGRSLCSDAPC
EDSGTTMELTEVQLVKGRCLSASAKGDEHLTRDKMCSDDRSHSVDAVFEDSSIAILDEDK
KNNCEAETSVLPGDKKNEIEVEMKHDFTAEPSCRTVGTSDTSIPLVKTSGNASIYDTDIE
QKSAEERTPDTYLKDSKQNTGIFATKAIENVHAEATEKILEEEMQILDHEYMYLGDEQKK
LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLF
GARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIE
VVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDVNYAKHSVEGVS
EFDESISQFDEDKQSAEYSQNMKKIFMDKHRNVSKNWHIPSSFPSEAVISAYFCPQVDKS
TESFSWGKPDLFVLRKFCWEKFGWGGDKSNELLVPVLKEYEKRETQLRLEAFYTFNERFA
KIRSKRIKKAVKGITGNQSLLLMDDAGQEVSKSRNKRKNNGLENGSNRSQKAPKKGEESV
SGAQNNMEKSSQSQSRKRKVLEKFVLAEMENPERLTPAGGGRNANNVFRGNRRGKGQRVG
RGRGRGRLCAEQSETSSSDDIGSDDTQEYYSEKFEGQQEVRRSTRSRKPVDYNVDDPEIA
DVGKILSNKESSNEEEAKQDSVHGVTGEASADYSRKKQHRADDPSIDKDYIERGGGFCID
DQEIGQPSVSPCDDPFLEAEITKDYMKMGGGFCHDESETREDQVAAKDPVVTGESPSTCF
DSSDGVHCDVGLGDSTTSSNSKEATNGLENVGRTDTFDTEPNPVVQNATSTDSARNDAGR
ASRGSLTAMTFLRRKRRRS
NT seq 5100 nt   +upstreamnt  +downstreamnt
atgggagtccacggtctctgggacttactcgcccccgttggccgtcgcgtgtccgttgaa
actctctccggcaaaaagcttgccatcgatgcgagcatatggatgatccaatttatgaag
gcgatgagagacgagaagggagagatggtgcggaacgcgcatttgatagggttttttcgt
cgaatttgtaagttattgtatctaaagacaaagccagtgtttgtcttcgacggtggcact
ccggcactcaagcgccgcactgtcattgcccgccgcaggcagcgcgagaacgcccaggct
aagatccgcaaaacagctgagaaactgcttattaatcatctcaagacaatgaggttgaaa
gaactcgcgctggatcttgagaaccaaaggcagatacagaagagagaccctgagggaaag
aaggttttgtcggatatggaaaattgttcggaaagaactgatggggtgtcggcaagtgat
gacaaggaaaatctagatgaaatgttggcagcatctattgcagcggaggctaatgagagt
tcaagtaagagtgcatcaaaatctgccactgcgaatctccttgaggaggatggtgatgaa
gatgaagagataatgttgccaacaatgggtggaaatgttgacccagctgtttttgctgct
ttgcctccatcaatgcagcatcagcttcttgttcggaacaatgacgcaaagggcaagaac
gttttatcggatgatttgggccaagccgatacggtgggcattagtccagaaagtcatgat
ggggtatcaaagagtcgtgatcacaaaatgcttgatgagatgttggcagcatctattgcg
gcagaagaagatggaagtttaagtaacaatgcatctgcatcagctgcttcacttcctttg
gaggaagaggatggtgatgaagatgaagagatgatactgcctgcaatgactggtaatgtt
gatccagccgttttagctgctctgcctccatcaatgcaactcgatctgcttgttcagatg
agagagcaattgatggcagaaaacagacaaaaatatcaaaaagtcaagaaggcccccgag
aaattctctgagctacaaatacaggcttatcttaaaactgttgctttccggcgggagata
gatgaagtgcagaaagctgctgctgggaggggggtagctggtgttcagacttcaagaata
gcatctgaagccaacagagaatttatcttttcatcatcatttactggggacaaacaagtg
cttacatcttccagagtagagggtaaaaaagatgagcaacaacagataccatctgaacac
cctgtttcagattccgtgaataatggtgcatctattgataagtccaatttttcatctact
gatcagtccaattctgtcacaaaattaggcccaggggagtctagaaagagttttgctgat
gatgttgagacatacctggatgagagagggcgtgtgcgactcagtaaagtgagagctatg
gggattcgtatgacccgtgatttgcaaaggaatttggcaatgatgaaagagattgagcaa
gacagaccaaatggaaacaatattacaggtgcagggtctatgcttactttgaacgaaact
ggcacgtcgaatgctgttccttctgagaaaagcaagtttataggaacatcacttgatgat
actaatgaatctgtaagctcgatagagagaaataagcagtctacgttaaaaagtggaatt
tctttagaattgtcatttaaagacaatagcgaaaacaactgtgatgacgatgatgatata
tttgctcatttagctgcaggaaaacctgtaatctttcctaattctccaagggcacattct
tctatttctgtttcagatagtgattgggaggaaggaactactgaaagaaaaggtagtagc
ttatctgatgatgccaatgcaggaattaatccccctcttaatcttgaggaggggggtatc
agcgatgagagtgaagtggaatgggaagaaggaccgtcttgtgctcccaaaagttccttg
tcatttcctgctgagtcagagaaaacagtttctaatattgaagaggaggctaacttgcag
gaggcaatcagaagaagtctcttggatgtatgcattgagaaacctaattatgctttatct
gaacataacaaatgtgaaaatttaggagaaaatgcttgtgatggtacttggttatatgat
agagaaaataatatggatgatccaaattttttgggagaaagtgtctctcagcaacatgaa
tcaatttgtgaatatgttgatggtctgggaaaactggatactgttggtggaataaataac
tcagaagtgattggttctttaggcagagagttgaagttgtatgaaccgcgtaattctgat
gaaaaggagatgctgataaataaaccatttgaaaaggacaattcctactttgaacagtca
aggcaaggcgcaaatgatggtgcaaatgatggaaggtctttgtgtagcgatgcaccgtgt
gaagactcaggtactactatggaactgacagaggtccaattagttaaggggcgttgcctg
agtgcttctgctaagggtgatgagcatcttacccgtgataaaatgtgttctgatgatagg
tctcatagtgttgatgctgtatttgaggactcatccattgccattctagatgaagataag
aaaaataattgtgaagctgaaacatctgttctccctggtgataagaaaaatgaaattgaa
gttgagatgaaacatgatttcacagctgaaccatcatgtcgtacagtggggacaagtgat
acttctatccccttggtgaaaacatctgggaatgcatcgatttacgacactgatattgag
caaaagtccgctgaagaaagaactcctgatacatatttaaaagatagcaaacaaaatacg
ggaatatttgcaactaaggcaattgaaaatgtccatgctgaagccacagagaaaattttg
gaggaggagatgcagattctagatcatgaatatatgtatcttggagatgagcagaaaaag
cttgaacgtaatgcggaatctgtgagcagtgagatgtttgcagagtgtcaggaactgctg
caaatgtttggcttaccctatattattgcacctatggaggcagaagctcaatgtgcttat
atggaacttgcaaaccttgttgatggtgttgtgactgatgattctgatgttttcttgttt
ggggcgcgaagtgtttacaagaatatattcgatgaccgcaaatacgtggagacgtacttc
atgcaggacatcgaaaaggaccttggtctgaccagggaaaagctaattcgcatggcgttg
cttctggggagtgattatactgaagggattagtgggattggtattgtcaatgccattgag
gtagtaaatgcattcccggaggaagatggcctttctaaattccgggagtggattgagtca
ccagatccaaccatcctagggaagtttgatgtacaaacaggagcaagttcaaggaaaaga
cgttcaagtgatggtgacaaagatgttaattacgcaaaacactctgtggaaggtgtctct
gaatttgatgaaagcatttcccaatttgatgaggacaagcaatcagctgagtacagccaa
aatatgaagaagattttcatggataagcatagaaatgtgagcaagaactggcacatacct
tcctcttttccaagtgaagcagttatttcagcatatttctgtccacaagtggataagtct
actgaatctttctcgtggggaaagccagacctctttgttcttcgcaaattttgctgggaa
aaatttgggtggggtggtgacaagtcgaatgagttgctcgtacctgttttgaaggaatat
gagaaacgtgagactcaactgcgactcgaagctttctacactttcaatgaaagatttgca
aaaattcgtagcaagcggattaagaaggctgttaaaggaataactggaaaccaatctcta
ctgctgatggatgatgctgggcaagaagtttccaaaagtagaaataagaggaagaataat
ggtcttgaaaatggcagtaatcgatcacaaaaagctccaaagaaaggggaggaaagtgtg
tctggagctcagaacaatatggaaaaatcatctcagagtcaatctaggaaaaggaaggta
cttgagaagtttgttttggctgagatggagaatccagaaagacttacaccggccggtggc
ggacgaaatgccaataatgtatttcgtggaaatagaagaggtaaaggtcagagagttgga
cgaggaaggggaagaggaaggctttgtgctgaacaatctgaaaccagctccagtgatgat
attggtagtgatgatacccaagaatattattctgagaaatttgaagggcagcaagaagtg
cgaaggtcaacacgttccaggaagcctgtggattacaatgtcgatgacccagaaattgct
gatgttggcaagattttgagtaataaagaatcttctaacgaagaggaagcaaagcaagat
tcggttcatggtgtaactggcgaagcttctgctgactatagcagaaagaaacagcacagg
gcagatgacccttcaattgataaagactatattgaaagaggaggtggattctgcattgat
gatcaggaaattggtcagccgagtgtgagcccgtgtgatgatccttttctcgaggcagaa
atcaccaaagattacatgaaaatgggaggtgggttttgtcacgatgaaagtgagacacgc
gaggaccaagttgctgctaaggacccagttgtcactggggagagtccatctacttgcttt
gattcttcagatggagttcactgtgatgttggattaggtgattcgactaccagttcgaac
tctaaagaagcaacaaatggacttgaaaatgtggggaggacggacacatttgatacagag
ccgaatccggtcgttcaaaatgcaaccagtactgatagtgctaggaacgatgctggtaga
gcctcccgaggatctcttactgctatgactttcttgaggagaaaacgtcgaaggagttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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