KEGG   Ciona intestinalis (yellow sea squirt): 100175674
Entry
100175674         CDS       T01056                                 
Name
(RefSeq) mitochondrial tRNA-specific 2-thiouridylase 1
  KO
K21027  tRNA-5-taurinomethyluridine 2-sulfurtransferase [EC:2.8.1.14]
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cin03016]
    100175674
Enzymes [BR:cin01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.14  tRNA-5-taurinomethyluridine 2-sulfurtransferase
     100175674
Transfer RNA biogenesis [BR:cin03016]
 Eukaryotic type
  tRNA modification factors
   Thiolation factors
    100175674
SSDB
Motif
Pfam: tRNA_Me_trans tRNA_Me_trans_C tRNA_Me_trans_M ThiI NAD_synthase Asn_synthase QueC Arginosuc_synth ATP_bind_3
Other DBs
NCBI-GeneID: 100175674
NCBI-ProteinID: XP_002121363
Ensembl: ENSCING00000019371
Position
5:complement(1749577..1753231)
AA seq 437 aa
MSKVICAISGGVDSAVAALLLKRRGLNVVGVFMRNWDLEDEVGQCSVQEDATYATRVCRA
LDIPFYEVNLVKEYWTNVFMPMVDQYEMGNTPNPDILCNQLVKFSAFHNKCSSMFGNVVI
ATGHYARTTLNDRVLTAKVPHTAEQRLLKAVDPFKDQTFFLHKVDRTALLRSYFPLGGIF
KSKVKEIAAASEISFVLKRKESAGICFIGRREFSNFIKNYISPKPGQFICYETGNVIGNH
DGYFSYTVGQRSLIGGLRISYAVLHRNSKDGNVLVVPGLNHPALYRKSLVSGPAHWIAGE
PALLREGKPLNCYFRFCHRNSLVPCTVHQLENERLLIILQHPLRAMTVGQDAVLYTEDEC
LGGAQIDDVGPSMYESQSQDKIVFDTFRDNCDLWLRMLDTYGPEVAAFSSADTTQQLDNY
NKQIKSFKQSQVLQDQS
NT seq 1314 nt   +upstreamnt  +downstreamnt
atgagtaaagtaatatgtgcgatatctgggggagttgacagtgctgttgctgctctgctg
ttaaaaagaagaggattaaatgtggtgggagtttttatgagaaactgggacctggaagat
gaagttgggcagtgtagtgtacaagaagatgcaacttatgcaactcgtgtgtgtagagca
ttggatataccattctatgaggtaaatctagtcaaggaatattggactaatgtgtttatg
ccaatggtggaccagtatgaaatgggaaataccccaaacccagacattctatgcaaccag
cttgtcaagttttcagcatttcataacaagtgctcctcaatgtttggcaatgttgtcata
gcaactggacattatgccagaacaacacttaatgatcgagttttaaccgcaaaagttccc
catactgcagaacaaagattgttgaaagctgtggaccctttcaaagatcaaactttcttt
ttacacaaagttgatagaactgccttgcttcgttcctattttcctcttggtgggattttc
aaatcaaaagtaaaggaaattgcagcagcttcagaaatctcatttgtgcttaaaagaaag
gagagtgctggtatttgtttcattggaagaagggaattctcaaattttattaagaattac
atttcgccaaaaccgggtcagtttatttgctacgaaactggtaatgtgattggaaaccac
gatggttacttctcgtatacagttggtcagcgttccttaataggtggtctacgtatctca
tacgctgttttgcatagaaattcaaaggatggaaatgtattagtggtaccaggcttaaac
caccctgccctgtacagaaagagtttagtgtctggaccagcacactggatagcaggagag
ccagctttgctaagagagggaaaacccctcaactgctactttcgtttctgccatagaaac
tcacttgtaccctgcacagttcaccaactggaaaatgaaagattactaattatcttacaa
catccattaagagctatgacagttggacaggatgctgtgttatatacagaagacgaatgt
ttaggtggtgcacaaatagatgatgtggggccttccatgtatgaatcacaatcacaagat
aaaatcgttttcgacacttttagagacaactgtgacttatggcttcgaatgttagataca
tatggccctgaagttgctgcgttctcaagtgcagatacaacacaacagttagataattat
aataagcagataaagtcttttaagcagtcacaagttttacaagatcaaagttga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (9)   
   Pfam (9)   
All databases (52)   

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