KEGG   Ciona intestinalis (yellow sea squirt): 100180961
Entry
100180961         CDS       T01056                                 
Name
(RefSeq) LOW QUALITY PROTEIN: cysteine--tRNA ligase, cytoplasmic-like
  KO
K01883  cysteinyl-tRNA synthetase [EC:6.1.1.16]
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    100180961
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:cin01007]
    100180961
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cin03016]
    100180961
Enzymes [BR:cin01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.16  cysteine---tRNA ligase
     100180961
Amino acid related enzymes [BR:cin01007]
 Aminoacyl-tRNA synthetase
  Class I (G)
   100180961
Transfer RNA biogenesis [BR:cin03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    100180961
 Prokaryotic type
    100180961
SSDB
Motif
Pfam: tRNA-synt_1e tRNA-synt_1c
Other DBs
NCBI-GeneID: 100180961
NCBI-ProteinID: XP_026692167
Position
1:complement(2833861..2846568)
AA seq 788 aa
MQTDAAGDGAGKRNLRKQPEWEPPSHSNTHCLKLFNSLTRQKEVFIPENGNFVKWYSCGP
TVYDASHMGHARSYISFDILRRVLMDYFGYNVLYCMNITDIDDKIITRARHNYLVDEYLK
QSHSKEEIITDVSAALEEFSEKLSKTDDPDKKVMMERLLKQATLSVDKLKTTEMPGEAVI
ADVVNQAKDPVANWLDKKHGAGVTDNSIFSALPQYWEREYFEDMDALNVSPPDVLTRVSD
YVPEIVKYVEEIIKNGYGYKSNGSVYFSVSQFDSSDDHFYARLVPEAVGDLQALQEGEGS
LSSVADQLNEKRAPNDFALWKASKPGEPSWESPWGKVSYSCFYRCLIFEVLGCLLDYMSW
YRRLTWVCKVCLYTPKNQNIPGYQVLMHKRFKHFINLXQDALKKNSARQLRLAFLLHSWK
DTLDYSDNTMHDAVQFEKLMNEFFLTVKDVLRNQPNKGPEAFKKWNQDEMNLAKLFSERQ
QSVHAALCDNIDTRTALDNLRQLVTASNTYIALKHEQKSLPDGQLLKNIAKYITWIFKVF
GAIAQSDEIGFPLTVGGNTASNVEEILMPYLNTLSQFRENVRAIARTHKGNLLVKVFGAI
AQSDEIGFPLTVGGNTASNVEEILMPYLNTLSQFRENVRAIARSHKVSEVLELCDSLRDD
ILPALGVRLEDKEGLKTIVKLVDKDQLMKEREEKKKLEEKKAKEKEESRLAAARKKEEKE
AQRKIPPSQLFSKQTDKFSAFDDQGFPTHSVDGKELSKGQTKKLRKLYDAQTKLYQEYMQ
SVSTQNGS
NT seq 2367 nt   +upstreamnt  +downstreamnt
atgcagactgatgcagcaggagacggcgcaggtaaacgtaacttacgtaagcaacccgaa
tgggaaccacccagccattcaaacacgcattgcttgaagctgtttaacagtttgactcgg
caaaaggaagtgtttatccccgaaaatggaaactttgtaaagtggtacagctgtggacca
actgtgtatgatgcatcacatatgggacacgcaaggtcttatatctcctttgatattcta
agaagagttttgatggattatttcggttacaatgtcctatactgtatgaatattacagat
attgacgataagataataacccgtgcaaggcataattacttggttgacgaatatttaaaa
caaagtcattctaaagaagaaataattacagatgtgtcagcagctttagaggaattttca
gaaaaattgtcaaaaactgatgatcctgacaagaaagtgatgatggaaagattgttaaag
caagctacattgtcagtggataagttaaaaactacagagatgcctggggaagctgtgatc
gcagatgtggtgaatcaggctaaagaccctgttgcaaactggctagataaaaaacatgga
gcaggtgtgacagacaactcaatattttcagctctacctcagtattgggagcgtgaatac
tttgaagatatggatgccttgaatgtttccccacccgatgtcttaacacgtgtgagcgat
tatgttcctgagattgtaaaatacgtcgaagaaattataaagaatggatacggttacaaa
tccaatggttctgtctacttctccgtgtctcagtttgattcctctgacgaccatttctac
gcgagacttgtccctgaagctgtaggagacctgcaagctctacaagaaggggaaggttca
ctcagcagtgtggctgatcaattgaatgaaaaacgtgcaccaaatgattttgctttgtgg
aaagcttcgaaaccaggggagccatcatgggaatcgccatggggcaaagtaagttacagt
tgtttttatagatgtctaatttttgaggtattagggtgtcttttggactatatgtcctgg
tataggcgtctaacatgggtatgcaaggtatgcttgtacaccccgaaaaatcagaatatc
cctggttaccaagtattaatgcataaacgattcaaacattttataaacttataacaggat
gcattgaaaaagaactcggctcggcagttaaggttggcgtttttacttcattcatggaaa
gatactttagattactctgacaacaccatgcatgacgctgtacagtttgaaaagcttatg
aatgagtttttcctaactgtaaaagatgttttacgaaaccaaccaaacaaaggaccagaa
gcgttcaagaaatggaaccaggatgaaatgaatctagctaagctgttttcagagaggcaa
caatcggttcatgctgcgttatgcgataacattgacactcgtacagctcttgacaacttg
cgtcaacttgtgactgcctcaaacacctatattgctttgaaacacgaacaaaagtcccta
ccggatggacagctgctgaaaaatatcgcaaaatatattacatggattttcaaggttttt
ggggcaatagcgcaatcagatgaaattggttttcctctcactgttggtggaaatactgct
tcgaatgttgaagaaattctcatgccgtatcttaatacattatcacagtttagggaaaat
gtacgcgccatagcaagaacacataaaggtaatttgctagtaaaggtttttggggcaata
gcgcaatcagatgaaattggttttcctctcactgttggtggaaatactgcttcgaatgtt
gaagaaattctcatgccgtatcttaatacattatcacagtttagggaaaatgtacgcgcc
atagcaagatcacataaagtgtccgaggtacttgagttatgcgactcactgcgagatgac
atcctccctgctctcggtgttcggttagaagataaagaaggattgaaaacaatcgttaaa
cttgtggataaggatcaactcatgaaagagagagaggaaaagaaaaagttagaagaaaag
aaggcaaaagaaaaagaagagagtaggttggctgctgcaagaaaaaaggaagagaaagaa
gctcaacggaaaattccaccatctcaactattttccaaacaaacagacaagttctctgcc
tttgatgaccagggttttcctacgcattctgttgacggtaaagagctcagcaaaggacaa
acaaagaaattacgaaaattatacgacgcacagacaaaactatatcaagaatatatgcaa
agtgtttcaactcaaaatgggagttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (60)   
   KEGG ORTHOLOGY (1)   
   RefGene (56)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (78)   

Download RDF
DBGET integrated database retrieval system