KEGG T01056: 100185058

Ciona intestinalis (yellow sea squirt): 100185058

Entry

100185058         CDS       T01056

Name

(RefSeq) eukaryotic translation initiation factor 3 subunit E-B

K03250

translation initiation factor 3 subunit E

Organism

cin Ciona intestinalis (yellow sea squirt)

Brite

KEGG Orthology (KO) [BR:cin00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:cin03012]
    100185058
   03051 Proteasome [BR:cin03051]
    100185058
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cin04147]
    100185058
Translation factors [BR:cin03012]
Eukaryotic type
  Initiation factors
   eIF-3
    100185058
Proteasome [BR:cin03051]
Eukaryotic proteasome
  Assembling factors
   Other assembling factors
    100185058
Exosome [BR:cin04147]
Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100185058

SSDB

Motif

Pfam:

eIF3_N PCI EIF3E_C CSN8_PSD8_EIF3K HTH_36 TPR_3

Other DBs

NCBI-GeneID:

100185058

NCBI-ProteinID:

XP_002130084

Ensembl:

ENSCING00000001964

Position

8:6062906..6067396

AA seq 445 aa
MAQFDLTSKVGCYLDRHLVFPLLEFLSERDIFDERDLHKGKLELLSNTNMVDFAMDVHKT
LYPGEEIPSSLRDKRNNVVSLLKSYTVKTEPIVHIFEQDEVRKQIETTRDGKQLFEYLEK
NHNFKLEDLDTLYDYAKFQYECGNYSGAAEYLYFHRVLVQPDDKRAMDSLWGKLASEILM
QDWDTAWEDLHRLQESIDSNTIASPLQLLQQRTWLIHWSLFVFFNHAKGRDEIIDLFLYQ
PPYLNTIQTMCPWVLRYLTTAVITNKRRRQVLKDLVRVIQQEAYTYRDPVTEFLECLYVH
FDFDKAQEKLRECELVLSNDFFLIACLDDFIENARLFIFETFCRIHQCISIDMLADKLNM
SVDEAERWIVNLIRNARLDAKIDSKMGHVMMGTQAVSSYEQVIEKTKSLGLRTQMLSTNV
ERRLNKERDRTDAVPHWAGGPKENW

NT seq 1338 nt +upstreamnt +downstreamnt
atggcgcagtttgatcttacatctaaagtaggatgttaccttgatcgtcatttagttttc
ccattgcttgaatttctctcggaacgagacattttcgatgagcgggacctacataaaggg
aagcttgagttacttagtaacaccaacatggtggactttgctatggatgtacacaagaca
ttatacccgggagaggaaatcccttcaagccttcgagacaagagaaacaacgttgtcagt
ttgttgaaatcatataccgttaaaactgagccaatagttcatatatttgagcaagatgaa
gtcagaaaacagattgaaacaactcgcgacggcaaacagttgtttgaatatttggaaaaa
aatcacaactttaaactggaagatcttgatacgttgtacgattatgcgaagttccaatac
gagtgtggaaactattcgggagctgcggagtatctctacttccatcgtgtgttggtacaa
ccggacgacaagagagcaatggactctctgtggggaaaactagcgagtgaaatattgatg
caggattgggacacagcgtgggaagatttacaccgcttgcaggaaagcattgactccaac
acaatagcaagccctctgcagttactccagcaaaggacatggctcatacattggtctcta
ttcgttttcttcaaccatgccaaaggaagagatgaaattattgatttgtttctttaccag
ccaccctacttaaacaccatacaaaccatgtgtccatgggtgctacggtatttaactact
gccgttatcactaacaagagaagaagacaggttcttaaagatttggtgcgagtgatccaa
caagaagcatacacatatcgtgaccctgtaactgagtttcttgaatgcctttacgttcac
tttgattttgacaaggcccaagaaaagctacgcgaatgcgaacttgttctttcaaacgat
ttcttcctcatcgcttgtttggacgattttatcgaaaacgctcgactctttatcttcgaa
actttctgtaggattcatcagtgcatcagtattgacatgcttgctgacaagctaaacatg
tccgtggacgaggccgaacgatggatcgtcaacttgatccgtaacgctcgtttggatgca
aagattgattcaaagatggggcatgttatgatggggacgcaagctgtctcatcatatgaa
caagtaattgagaaaacgaagagtttaggtttacgaacccaaatgttgtcgacaaacgtt
gaaagaaggttgaataaagaaagagatcgaacagatgctgttccccactgggcaggaggg
ccaaaagaaaattggtga

All links

Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (189)   
   KEGG ORTHOLOGY (1)   
   RefGene (184)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (202)   

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