KEGG   Ciona intestinalis (yellow sea squirt): 445674
Entry
445674            CDS       T01056                                 
Symbol
hox5
Name
(RefSeq) Hox 5
  KO
K09305  homeobox protein HoxA/B/C5
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cin03000]
    445674 (hox5)
Transcription factors [BR:cin03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain ANTP: HOXL
    445674 (hox5)
SSDB
Motif
Pfam: Homeodomain DUF2209
Other DBs
NCBI-GeneID: 445674
NCBI-ProteinID: NP_001027665
Ensembl: ENSCING00000001363
UniProt: O18313
AA seq 220 aa
MDLNNANFNALLRHPIASDALLRHKASLQSHSSVAGTSSNGYFVPESRNTSKYSENQPLS
SMTHEWGIMEPRPINSQHPGHVMQHPFHGNDVIRDHHGFVTSPSIRDVTERKSDESSDGS
DRDAIIYPWMKRIHGGETPDPSKRTRTAYTRYQTLELEKEFHYNRYLTRRRRIEVAHTLC
LTERQIKIWFQNRRMKWKKENKLSSLNSVTHVSGPLSGDD
NT seq 663 nt   +upstreamnt  +downstreamnt
atggatttgaacaatgctaactttaatgctttgttacgtcaccccattgcttcagatgca
ttattacgtcataaagcatcacttcaaagtcattcgagcgtagctggtacgtcatcaaac
ggatatttcgttccagaatcgagaaacacttccaagtattctgaaaatcaaccattatca
tctatgacgcatgaatggggtattatggaacctcgtccaatcaacagccagcatcccggt
cacgtgatgcagcatccttttcacggaaatgacgtcattcgcgaccaccatggtttcgtg
acgtcaccttccattcgtgacgtcaccgagcgtaagagtgacgaaagcagtgacggaagc
gatcgtgacgcaataatatacccgtggatgaaaagaattcatggaggggaaaccccagac
ccgagcaagcgaaccaggacagcttacacgaggtaccagacattggaacttgaaaaagag
tttcattacaaccgttacctaacccgtcgtcgccgcatagaggtcgcccatactttgtgt
ctcaccgaacgtcagatcaagatatggtttcaaaacaggaggatgaaatggaagaaagaa
aacaaactttcttcacttaattctgtcactcatgtgtcggggccgctaagcggtgacgac
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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