KEGG   Chryseobacterium indologenes: CEQ15_15765
Entry
CEQ15_15765       CDS       T04932                                 
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
cio  Chryseobacterium indologenes
Brite
KEGG Orthology (KO) [BR:cio00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cio03009]
    CEQ15_15765
Enzymes [BR:cio01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     CEQ15_15765
Ribosome biogenesis [BR:cio03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    CEQ15_15765
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_31 TRAM Methyltransf_25 Cons_hypoth95 Met_10 N6_N4_Mtase Methyltransf_15 Methyltransf_11 FtsJ Methyltransf_4 RrnaAD PCMT UPF0020 PrmA 2-ph_phosp
Other DBs
NCBI-ProteinID: ASE62842
UniProt: A0A4U8VP95
Position
complement(3502282..3503688)
AA seq 468 aa
MRKKKNIILENIRLVAAGAKGVAIGRTEEGKTVLVSGAIPGDLVNVRVKKAKSKYYEGEA
TDVLEKSPYRTEPKCIHFGTCGGCKWQNMTYEKQLDFKQEEVYNNIKRIGGIEDFETVSI
LGSEEQYFYRNKMEFSFSNARWLTQYEISSEENFGSKDALGFHIPGMWSKILDLKECFLQ
EDPSNAIRLAVKEYAVDNGLDFFDVRNHEGFLRTLMMRQNSKGEWMVLFQLFREEKENRE
KLFQFLLEKFPQIKTLVYAINPKANDSIYDLDINVYFGDGYLMEEMDGLQFKIGPKSFFQ
TNYKQALELYRKTLEFADLKGDEVVYDLYTGTGTIAQYVARNAKQVIGIESVQEAIDAAI
EHAELNGLTNTTFYCGDMKNVFNDEFMENHPKADVLITDPPRDGMHQKVVEQILKLAPEK
VVYVSCNSATQARDLALMKDDYTLVKILPVDMFPQTHHVENIALLVKK
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgagaaagaagaaaaatattattcttgaaaatatcagactggtagctgccggtgcaaaa
ggagttgctattggtagaacagaggaggggaaaacagtactggtttcgggtgccattccc
ggagatttggtaaatgtcagagtcaaaaaagcgaaatccaaatattatgaaggtgaagcg
accgatgtattggaaaaatctccttacagaacagaacctaagtgcatacactttggaact
tgtggaggatgcaaatggcaaaacatgacctacgagaagcagcttgattttaaacaggaa
gaagtttataacaatattaagagaatcggggggattgaagattttgaaaccgtatctatt
ctgggatctgaagaacagtatttttatagaaataaaatggagttttctttctctaatgcc
agatggctgactcaatatgaaatcagctctgaagaaaattttggaagtaaagatgcctta
ggattccatattccgggaatgtggagtaagattcttgaccttaaagaatgttttcttcag
gaagatccttccaatgccataagacttgccgtaaaagaatatgctgttgacaatgggctg
gacttttttgatgtaagaaatcatgaaggatttttaagaaccttaatgatgagacagaat
tctaaaggtgagtggatggttcttttccagcttttcagggaagaaaaagaaaacagggaa
aagcttttccaattcttattagagaaatttcctcagataaaaactctggtgtatgccatt
aatccaaaagcgaatgactcaatctatgacttggatatcaatgtatattttggtgacgga
tacctgatggaggaaatggatggactgcagttcaaaataggtcccaaatcattctttcaa
accaactacaaacaggcattggaattatacagaaaaacattggagtttgctgatctgaaa
ggagatgaagtagtgtatgatctgtatacgggaaccggaactattgcccaatatgtggca
agaaatgcaaaacaggtaattggtattgaatctgtgcaggaagcaattgatgcagcaatt
gaacatgccgaattgaacggtcttaccaatacaactttttattgtggagatatgaaaaat
gtctttaacgatgaattcatggaaaaccatccaaaagcagatgtattgattactgatccg
ccaagggacggaatgcaccagaaagtcgttgaacaaatattgaaactggctccggaaaaa
gtagtttacgtaagctgtaattctgcaacccaggcaagagatcttgctctgatgaaagac
gattatactttagtgaaaatattaccggtagatatgtttccgcaaacacaccatgttgag
aacattgccttgttggttaaaaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system