KEGG   Citrus sinensis (Valencia orange): 102612913
Entry
102612913         CDS       T02983                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 15b
  KO
K13098  RNA-binding protein FUS
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03015  mRNA surveillance pathway
cit03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102612913
  09122 Translation
   03015 mRNA surveillance pathway
    102612913
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cit03041]
    102612913
Spliceosome [BR:cit03041]
 Complex A
  Other components
   Complex A specific factors
    102612913
SSDB
Motif
Pfam: RRM_1 zf-RanBP
Other DBs
NCBI-GeneID: 102612913
NCBI-ProteinID: XP_006488581
Position
8:join(30302249..30302459,30302566..30302656,30303199..30303895,30304349..30304499,30304599..30304659,30305245..30305371)
AA seq 445 aa
MSGMYGQEGGDPAYVGGGYGGGGSAGVYGGYGGDGGGGYSGGGGRGGGYGGGRGGGGRGG
GYGGGYSQNRGGDRGGRGGGGRGGGRGGSGRDGDWKCPNPSCGNLNFARRVECNKCGAPS
PAGASDRTASGGSGGYNRGGSGGGFGGNRGGRGDGGRANYDGGRGTYEGRSGGGNRGSSY
GGSQGREDTSYGHVPPSSYPGASGNYPPANSYGGNTNYEMDAVPPPTSYTGGPTSYPPSY
GGPVGGYGGDSFGDAGGGSRAGPPAAYDSGYAGGGPRYQGGSYSNAPADTSAKVKQCDGN
CDSYCDNSRIYISNLPPDVTVDELRELFGGIGTVGRIKQKRGYKDQWPWNIKLYTDEKGN
NKGDAVLSYEDPAAAHAAGGFFQDHEIRGYKISVVMAEKTALKTGGGGGGGRGGYGNGGD
RRRDNYRDGGGPDRHQHGGNRSRPY
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgtctgggatgtacggacaagaaggcggagatcctgcctacgttggaggcggatacggc
ggaggaggcagtgctggtgtttatggaggttatggaggcgatggtggtggcggttatagt
ggaggcggcggtcgtggtggaggatatggtggcggtcgtggcggtggtggaagaggcgga
ggatacggtggtggttattcgcaaaatcgagggggagatcgcggtggcagaggtggcggt
ggacgaggtggcggccgcggtggaagcggtagagatggagattggaagtgtcctaaccct
agctgtgggaatttgaattttgcaagaagggttgagtgtaacaagtgtggcgcaccctct
cctgcgggtgcaagtgatcgaactgccagtggcggcagcggtggatataacaggggagga
agtggtggtggatttggtggtaatcgtggtggtcgaggtgatggtggccgagccaattat
gatggaggtagaggtacctatgaaggtagaagtggaggaggtaacagaggcagctcttat
ggtgggagtcaaggaagagaagatactagttatggtcatgttccaccatcatcgtatccg
ggggctagtggaaactacccaccagctaattcttatggtgggaatacaaattatgaaatg
gatgcagttcctccacctacaagctatacaggtggcccaacatcttaccccccatcctat
ggtggtcctgtgggtggatatggtggtgatagttttggcgatgcggggggtggcagcagg
gctggcccacctgctgcttatgatagtgggtatgctggtgggggtcctcggtaccagggt
ggcagttatagtaatgcacctgctgatacctcggctaaggttaagcagtgcgatgggaat
tgtgatagttattgtgacaactcaaggatatacatatcaaatttgccgccagatgtgaca
gttgacgaattgagggaactttttgggggcattggaacagttggaagaataaagcagaag
cgaggctacaaagatcaatggccatggaacataaaattgtacacagatgagaagggaaac
aacaaaggtgatgcagttttgtcctatgaagatccagctgctgcacatgctgctggtggt
tttttccaagatcatgaaataagaggttacaaaatcagtgtggtgatggcagagaagact
gcactgaaaactggtggtggtggtggcggtggtagagggggctatggcaatggtggagac
aggcgcagggataattatagagatggtggtgggccagatagacatcaacatggtggaaac
cgttcgcgcccatattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (8)   
   RefSeq(nuc) (8)   
Protein domain (2)   
   Pfam (2)   
All databases (46)   

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