KEGG   Citrus sinensis (Valencia orange): 102621252
Entry
102621252         CDS       T02983                                 
Name
(RefSeq) nuclear cap-binding protein subunit 2
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03013  Nucleocytoplasmic transport
cit03015  mRNA surveillance pathway
cit03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102621252
  09122 Translation
   03013 Nucleocytoplasmic transport
    102621252
   03015 mRNA surveillance pathway
    102621252
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cit03019]
    102621252
   03041 Spliceosome [BR:cit03041]
    102621252
Messenger RNA biogenesis [BR:cit03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     102621252
Spliceosome [BR:cit03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    102621252
SSDB
Motif
Pfam: RRM_1 DUF5721
Other DBs
NCBI-GeneID: 102621252
NCBI-ProteinID: XP_006469933
Position
2:complement(join(11750963..11751037,11751475..11751581,11751683..11751736,11752066..11752176,11752383..11752416,11752517..11752655,11752870..11753093,11753219..11753236))
AA seq 253 aa
MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI
KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKLVQRELEAQRQLVDYGTGSLNSFQPVMQPRYGRHG
GGHGHGGSHRHGRDYQRKRHREDDRHAHETSKRSADFESRRNSDHDSRPEKNPRFRESGD
SDDDEDDDRKQRS
NT seq 762 nt   +upstreamnt  +downstreamnt
atggcttctctattcaaggatcaaaggaagctttcagcttatcgtgacagaaggtttccg
gggactcaagaagaattcgaggaagcgttgctagcttcaactactgtttacgtcgggaac
atgtcgttttacacgacggaagagcaaatttatgagcttttttcacgagctggggaaatt
aagaaaatcatcatgggtttggacaagaactccaaaacgccctgtggcttctgttttgcc
ttattctactctagagaagataccgaagatgctgtcaaatatataagtgggacgattctt
gatgatcgtcctattagagttgattttgattggggttttcaggatggaaggcaatggggt
cgtggtcgaagtggtgggcaggtgcgggatgaataccgaacagattatgatcctggcaga
ggtggttatggaaaattagttcagagagagttagaagcacaaagacagcttgtagattat
ggtactggttcattgaactctttccagccggttatgcaacctcgttatggtagacatggt
ggaggccacggacatgggggctctcatcggcatggcagagattatcaacggaagcgacat
cgggaagatgatcgtcatgcacatgagacgtcaaagagaagtgcagattttgaatctagg
agaaattctgatcatgactcaagaccggagaagaatccacgtttccgtgaaagtggtgac
tctgatgatgatgaggatgatgatagaaagcaaagatcttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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