KEGG   Citrus sinensis (Valencia orange): 102630147
Entry
102630147         CDS       T02983                                 
Name
(RefSeq) translation initiation factor IF-2, chloroplastic
  KO
K02519  translation initiation factor IF-2
Organism
cit  Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:cit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:cit03012]
    102630147
   03029 Mitochondrial biogenesis [BR:cit03029]
    102630147
Translation factors [BR:cit03012]
 Eukaryotic type
  Initiation factors
   MTIFs
    102630147
 Prokaryotic type
   102630147
Mitochondrial biogenesis [BR:cit03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Mitochondrial translation factors
    102630147
SSDB
Motif
Pfam: GTP_EFTU IF-2 MMR_HSR1 GTP_EFTU_D2 Ras IF2_N PDZ_6 RsgA_GTPase Roc Arf
Other DBs
NCBI-GeneID: 102630147
NCBI-ProteinID: XP_006478012
Position
3:join(16135581..16137092,16137212..16137244,16137495..16137608,16137814..16137963,16138091..16138189,16138268..16138330,16138769..16138924,16139078..16139143,16141038..16141274,16141786..16142061,16142363..16142551,16143083..16143244)
AA seq 1018 aa
MLVLVGTMPSLASLVSLGSISVTGTTSCCSESSCCSLVKRVSLTKRNFKGKKRWVCKYSV
TTQTTTTTTDFIEQGNGSAVSFDSNTFRGRNSDNDSDGDDNGIVLKPAPRPVLKSLGVKG
GASVSGVNSMGWDPSRVGEDSDEEERNKVIESLDEVLEKAEKLETRNESGNVSVNKATLP
NVSADTKNGRPMNSVGAKKSKTLKSVWKKGDSVASIQKVVKETPKTKVKKEEPKMGGDMK
MESQLNIPPRPVQPPLRPQPKLQTKPSVASTPVIKKPVVLKDVGAGQKSSTIGEADSAVK
NKERKPILIDKFASKKPAVDPLISQAVLAPTKPGKGPAGKFKDDYRKKGGPRKRIVDDDD
EIPDEEASELIPGAARKGRKWTKASRKAAKLKAAKDAAPVKVEILEVGEKGMLIEELARN
LAIGEGEILGSLYSKGIKPEGVQTLDKDMVKMICKDYEVEVLDADPVKMEEMARKKDLFD
EEDLDKLEDRPPVLTIMGHVDHGKTTLLDHIRKTKVAAAEAGGITQGIGAYKVQVPVDGK
LQPCVFLDTPGHEAFGAMRARGARVTDIAVIVVAADDGIRPQTNEAIAHAKAAGVPIVIA
INKIDKDGANPERVMQELSSIGLMPEDWGGDIPMVQISALKGEKVDDLLETIMLVAELQE
LKANPHRNAKGTVIEAGLHKSKGPVATFILQNGTLKKGDVVVCGEAFGKVRALFDDSGNR
VDEAGPSIPVQIIGLNGVPIAGDEFEVVDSLDVAREKAEARAFSLRNERISAKAGDGKVT
LSSLASAVSAGKLSGLDLHQLNVIMKVDVQGSIEAVREALQVLPQDNVTLKFLLQATGDI
SASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLET
VEEQVPIGSAEVRAIFSSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVK
ENVKEVNAGLECGVGAADYDDLEEGDIIEAFNSIQRKRTLEEASASMASALEGAGIEL
NT seq 3057 nt   +upstreamnt  +downstreamnt
atgttggttctagtgggaacgatgccgtctttggcttcgttggttagtttaggaagtata
agtgtcactggcacaacgagttgttgttcagaatcatcatgttgttctttagttaagaga
gtttctctgacaaaacgcaattttaagggtaaaaaaagatgggtttgtaaatattctgtt
accacacaaactacaactacaactactgattttattgagcaaggtaatgggtcagctgtg
tcgtttgattctaacacgtttaggggaagaaatagtgataatgatagtgatggggatgat
aatggaattgttctaaagcctgctcccaggcccgtgctgaagtcgttgggagtcaagggt
ggagcatctgtttcgggtgtgaattcaatgggttgggacccttcgagagtgggtgaggat
tcggatgaggaggagaggaataaggtgattgagtcacttgacgaggttttggagaaggct
gagaaattagagactagaaatgaaagtgggaatgtgagtgtaaataaagcgacgctgcct
aatgtgagtgctgatacaaaaaatggtagaccaatgaattcagtgggagcaaagaagagt
aagactttgaagagtgtgtggaaaaagggggattctgtggcaagtatacagaaggttgta
aaggaaacacccaagactaaggtaaaaaaagaggagcctaaaatgggaggagacatgaag
atggagtctcagctgaatattcctccgaggcctgtacagccacctttgagacctcaacca
aaactacaaacaaagccatcagtagcttctacacctgtgataaagaaacccgttgtttta
aaagatgtgggggcaggtcaaaagtcgtccaccattggtgaagctgactcagccgtgaaa
aataaagaacggaaaccgattttgattgataagtttgcatccaagaaaccggcggttgat
cctctgatttctcaagcagtcttggccccaacgaaacccggaaaaggacctgctggaaaa
ttcaaggatgactatcgtaagaaaggaggacctcggaaacgaattgttgatgatgatgat
gagattcctgatgaggaggcatctgaactgattcctggtgcagcaaggaaagggaggaaa
tggactaaagctagccggaaagcggctaaacttaaagctgccaaagatgcggctcctgtc
aaagtagaaattcttgaggttggggagaagggtatgttgatagaggagttagctcgcaat
ttggccattggcgaaggtgaaatccttggttctttatattcaaagggtattaagcctgaa
ggggtacaaactctagacaaagacatggtgaagatgatatgtaaagattatgaagtggaa
gtcctagatgctgatcctgttaaaatggaagaaatggctaggaagaaagacctatttgat
gaagaagacctggacaagcttgaagacaggcctcctgtccttacaattatgggtcatgtg
gatcatggaaagacaactcttttggatcatatccgtaaaaccaaggtggctgctgcagaa
gcaggggggattacacaaggaattggggcgtataaggtgcaagtacctgtcgatggcaaa
ttacaaccatgtgtttttcttgacactccgggacatgaggcatttggggctatgagagct
cgtggagcaagagtgacagacattgctgtcattgtagtggctgctgatgatgggattcgt
cctcaaacaaatgaggcaatagctcatgccaaagcggctggagttccaattgtgattgct
ataaataagatagataaagacggagctaatccagaacgagtcatgcaagagctttcttcc
attggtctgatgccagaagactggggtggtgacatcccaatggttcagatcagtgctctc
aaaggggagaaagtagatgatttgttggaaaccattatgcttgttgcagagttgcaagag
ttgaaggctaatcctcatagaaatgcaaagggcacagttatcgaggctggtctacacaaa
tctaaagggccagtagctacatttattttgcaaaatgggacacttaaaaaaggggacgta
gtagtttgtggagaagcctttggaaaggtacgggctttatttgatgacagtgggaatcgt
gttgatgaagctggaccctctatacctgtacagattattgggctgaatggagttccgatt
gctggtgatgaatttgaggtcgttgattcactcgatgtagcacgtgaaaaggcagaagca
cgtgctttttcattgcgtaatgagcgaatatcagctaaggctggagatgggaaggtcaca
ctttcttctttagcttctgcagtttcagcagggaagctgtctggattagacttgcaccag
ctgaatgttattatgaaggttgacgttcagggatccattgaggctgtcagagaagccctg
caagtgctgccacaagataatgtcactttgaagttcctcttgcaagcgacaggggatatc
agtgctagtgatgttgatcttgcggttgctagcaaagccattattttgggtttcaatgtt
aaagcaccaggatctgttaagacttatgcagataacaaaggtgttgagattcgactatac
agagttatctatgatctcattgatgatatgagaaatgcaatggaaggactgctagagact
gttgaggaacaagtaccgattggctcagctgaagtccgggccatctttagcagtggcagt
ggtcgtgttgctggatgcatggtatcagagggaaaattagtgaaaggctgtggcattcgg
gtcattcgagatggaaagacagtccatgttggtgtgcttgattctttgagacgggttaaa
gaaaatgtaaaagaggtaaatgctggattagagtgtggtgttggagctgctgactatgat
gatttggaagagggagacattattgaggccttcaactccattcagaggaaacggaccctt
gaggaggcatcagcttcaatggcttctgcattggaaggagccggaattgaattatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (10)   
   Pfam (10)   
All databases (45)   

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