KEGG   Cellvibrio japonicus: CJA_3570
Entry
CJA_3570          CDS       T00721                                 
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase, omega chain
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
cja  Cellvibrio japonicus
Pathway
cja03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cja00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CJA_3570 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cja03021]
    CJA_3570 (rpoZ)
   03400 DNA repair and recombination proteins [BR:cja03400]
    CJA_3570 (rpoZ)
Enzymes [BR:cja01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CJA_3570 (rpoZ)
Transcription machinery [BR:cja03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CJA_3570 (rpoZ)
DNA repair and recombination proteins [BR:cja03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CJA_3570 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: ACE84814
UniProt: B3PGX5
Position
4264775..4265041
AA seq 88 aa
MVAIFMARITVEDCLAHVDNRFELVMVGSKRARQLAIGGKDPFVPVENDKPTVIALREIE
EGFIDASILLEKDVLPQPKQEPVYDTEL
NT seq 267 nt   +upstreamnt  +downstreamnt
ttggtagcgatttttatggcacgtattactgttgaagactgtttggcccacgtagacaac
cgtttcgaactggtgatggttggcagcaagcgcgcgcgccagttggccattggcggcaag
gacccctttgttccggtagaaaacgataaacccaccgtaatcgccctgcgcgaaatcgaa
gaaggttttatcgatgccagtattctcttggaaaaagacgttctgccccaacctaagcaa
gaaccggtttacgataccgaactgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (20)   

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