KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100389011
Entry
100389011         CDS       T03264                                 
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
  KO
K14442  ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100389011 (DHX36)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cjc03019]
    100389011 (DHX36)
Enzymes [BR:cjc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     100389011 (DHX36)
Messenger RNA biogenesis [BR:cjc03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     100389011 (DHX36)
SSDB
Motif
Pfam: OB_NTP_bind DEAD HA2_C Helicase_C HA2_N AAA_22 AAA_19 nSTAND3 PhoH AAA_14 ATPase AAA_23 DUF6782 AAA_34 RsgA_GTPase
Other DBs
NCBI-GeneID: 100389011
NCBI-ProteinID: XP_035133701
Ensembl: ENSCJAG00000000986
Position
17:24149108..24197780
AA seq 1010 aa
MSYDYHQNWGRDGGPRSSGGGCGGGPAGGHRGSRGSGGGGGGGGGGGGRGGRDRHPGHLK
GREIGLWYARKQGQKNKEAERQERAVVHMDERREEQIVQLLNSVQAKNDKEPEAQISWFA
PEDHGYGTEVSTKNTPRSEKKLDNQEMKLINQEKKVFRIRNKSYIDRDSEYLLQENEPDG
TLDQQLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTT
QVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQS
RLPRKQGSILYCTTGIILQWLQSDPHLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRS
DLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPEQKEQRSQF
KRGFMQGHVNRQEKEEKDAIYKERWPDYVRELRRRYSSSTVDVIEMMDDDKVDLNLIVAL
IRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFK
RTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSQANAKQ
RKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRL
MDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPV
LTIAASLSFKDPFVIPLGKEKIADARRKELAKDTRSDHLTVVNAFKGWEEARRRGFRYEK
DYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPESNINSDNEKIIKAVICAG
LYPKVAKIRPNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTDFHYNWLIYHLKMRTSSIY
LYDCTEISPYCLLFFGGDISIQKDNDQETIAVDEWIIFQSPARIAHLVKELRKELDILLQ
EKIENPHPVDWNDTKSRDCAVLSAIIDLIKTQEKATPRNLPPRLQDGYYS
NT seq 3033 nt   +upstreamnt  +downstreamnt
atgagctatgactaccatcagaactggggccgtgatgggggaccccgcagctccggtggg
ggctgtggagggggtcctgcagggggtcaccgagggagccgaggctccggaggaggtggc
ggcggcggcggaggtgggggtggtcgaggcggcagggataggcatcccgggcacctgaaa
ggccgcgaaatcggcttgtggtacgcaagaaaacagggacagaagaacaaggaagcggag
aggcaagagagagctgtagtgcacatggatgaacgacgagaagaacaaattgtgcagcta
ctgaattccgttcaagcaaagaatgataaagagccggaagcacagatatcctggtttgct
cctgaggatcatggatatggtactgaagtttctactaagaacacaccacgctcagagaag
aaacttgacaaccaggaaatgaagttgataaaccaagaaaaaaaagtgtttagaatcagg
aacaaatcctatattgatcgagattctgagtatctcttgcaagaaaatgaaccagatgga
actttagaccaacaattattggaagatttacaaaagaaaaaaaatgaccttcggtatatt
gaaatgcagcatttcagagaaaagctgccttcatatggaatgcaaaaggaattggtaaat
ttaattgataaccatcaagtaacagtaataagtggtgaaactggttgtggcaaaaccact
caagttactcagttcattttggataactacattgaaagaggaaaaggatctgcttgcagg
atagtttgtactcagccaagaagaattagtgccatttcagttgcagaaagagtggctgca
gaaagggcagaatcttgtggcaacggtaatagcactggatatcaaattcgtctccagagt
cggttgccaaggaaacagggttctatcttatactgcactacaggaattatccttcagtgg
ctccagtcagacccgcatttgtccagtgttagtcatatcgtacttgatgaaatccatgaa
agaaatctgcagtcagatgttttaatgactgttgttaaagatcttctcaattttcgatct
gacttgaaagtaatattgatgagtgcaacgttgaatgcagagaagttttcagaatatttt
ggtaactgtccaatgatacatatacctggttttacctttccggttgtggaatatcttttg
gaagatataattgaaaaaataagatatgttccagaacaaaaagaacagcgatcccagttt
aagaggggtttcatgcaagggcatgtaaatcgacaagaaaaagaagagaaagacgcaata
tataaagaacgttggccagattatgtaagggaactgcgaagaaggtattcttcaagtact
gtagatgttattgaaatgatggatgatgataaagttgatctgaatttgattgttgccctt
atccgatacattgttttggaagaagaggatggtgcgatactggtctttctgccaggctgg
gacaatatcagcactttacatgatctcttgatgtcacaagtaatgtttaaatcagataaa
tttttaattatacctttacattcactgatgcctacagttaaccagacacaggtgtttaaa
agaactcctcctggtgttcggaaaatagtaattgctaccaacattgcagagactagcatt
accatagatgatgtcgtttatgtgatagatggaggaaaaataaaagagacacattttgat
actcagaacaatatcagtacaatgtccgctgagtgggttagtcaagctaatgccaaacag
aggaaaggtcgagctggaagagttcaacctggacattgttatcatctgtataatggtctt
agagcaagtcttctagatgactatcaactgccagaaattttgagaactcctttggaagaa
ctttgtttacaaataaagattttaaggctaggtggaattgcttattttctgagtaggtta
atggatcccccatcaaatgaggcagtgttgctctccataagacacctgatggagctgaat
gctttggataaacaggaagaattgacacctcttggagtccacttggcacgattacccgtt
gagccacatattggaaaaatgattctttttggagctctgttctgctgtttagacccagta
ctcactattgctgctagtctcagtttcaaagatccatttgtcattccattgggaaaagaa
aagattgcagatgcaagaagaaaggaattggcaaaggatactagaagtgatcacttaaca
gttgtgaatgcatttaagggctgggaagaagctaggcgacgtggtttcagatacgaaaag
gactattgctgggaatattttctgtcttcaaacacactgcagatgctgcataatatgaaa
ggacagtttgctgagcatcttcttggagctggatttgtaagcagtagaaatcctaaagat
ccagaatctaatataaattcagataatgagaagataattaaagctgtcatctgtgctggt
ttatatcccaaagttgctaaaattcgaccaaatttgggtaaaaaaagaaaaatggtcaaa
gtttacacaaaaaccgatggactggttgctattcatcctaaatctgttaatgtggagcaa
acagactttcactacaactggcttatctatcacctaaagatgagaacaagcagtatatac
ttgtatgactgcacagagatttccccatactgtctcttgttctttggaggtgatatttcc
atccagaaggataatgatcaggaaactattgctgtagatgagtggattatatttcagtct
ccagcaagaattgcccatcttgttaaggaattaagaaaggaactagatattcttctgcaa
gagaaaattgaaaatcctcatcctgtagactggaatgatactaaatccagagactgtgca
gtactgtcagctattattgacttgatcaaaacacaggaaaaggcaactcccaggaacttg
ccaccacgattgcaggatggatattacagctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (15)   
   Pfam (15)   
All databases (42)   

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