KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100398526
Entry
100398526         CDS       T03264                                 
Symbol
TRA2B
Name
(RefSeq) transformer-2 protein homolog beta isoform X1
  KO
K12897  transformer-2 protein
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03040  Spliceosome
cjc04936  Alcoholic liver disease
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100398526 (TRA2B)
 09160 Human Diseases
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    100398526 (TRA2B)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cjc01009]
    100398526 (TRA2B)
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cjc03041]
    100398526 (TRA2B)
Protein phosphatases and associated proteins [BR:cjc01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100398526 (TRA2B)
Spliceosome [BR:cjc03041]
 Common components
  Common spliceosomal components
   SR proteins
    100398526 (TRA2B)
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_3 FMP27-BLTP2_C
Other DBs
NCBI-GeneID: 100398526
NCBI-ProteinID: XP_008979594
Ensembl: ENSCJAG00000014710
UniProt: F7EAU7
Position
15:complement(8609288..8630777)
AA seq 288 aa
MSDSGEQNYGERESRSASRSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRS
RRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCL
GVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERAN
GMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSY
RGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGGYRSRSRSRSYSPRRY
NT seq 867 nt   +upstreamnt  +downstreamnt
atgagcgacagcggcgagcagaactacggcgagcgggaatcccgttctgcttccagaagt
ggaagtgctcacggatcggggaaatctgcaaggcatacccctgcaaggtctcgctccaag
gaagattccaggcgttccagatcaaagtccaggtccagatctgaatctaggtctaggtcc
agaagaagttcccgaaggcattatacccggtcacggtctcgctcccgctcccatagacga
tcgcgtagcaggtcttacagtcgagattatcgcagacggcacagccacagtcattctccc
atgtctactcgcaggcgtcatgttgggaatcgggcaaatcctgatcctaactgttgtctt
ggagtatttgggttgagcttgtataccacagaaagagatctaagagaagtgttctctaaa
tatggtcccattgctgatgtgtctattgtatatgaccagcagtctaggcgttcaagagga
tttgcctttgtatattttgaaaatgtagatgatgccaaggaagctaaagaacgtgccaat
ggaatggagcttgatgggcgtaggatcagagttgatttctctataacaaaaagaccacat
acgccaacaccaggaatttacatggggagacctacctatggcagctctcgccgtcgggat
tactatgacagaggatatgatcggggctatgatgatcgggactactatagcagatcatac
agaggaggcggtggcggaggaggaggatggagagctgctcaagacagggatcagatttac
agaagacggtcaccttctccttactatagtcgtggaggatacagatcacgttccagatct
cgatcgtactcacctcgtcgctattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (16)   
   RefSeq(nuc) (4)   
   GenBank (6)   
   EMBL (6)   
Protein domain (4)   
   Pfam (4)   
All databases (64)   

Download RDF
DBGET integrated database retrieval system