KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100401323
Entry
100401323         CDS       T03264                                 
Symbol
DDX41
Name
(RefSeq) probable ATP-dependent RNA helicase DDX41
  KO
K13116  ATP-dependent RNA helicase DDX41 [EC:5.6.2.7]
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    100401323 (DDX41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cjc03041]
    100401323 (DDX41)
Enzymes [BR:cjc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     100401323 (DDX41)
Spliceosome [BR:cjc03041]
 Complex C
  Other components
   Complex C specific factors
    100401323 (DDX41)
SSDB
Motif
Pfam: DEAD Helicase_C zf-CCHC ResIII UTP25 ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 100401323
NCBI-ProteinID: XP_017825033
Ensembl: ENSCJAG00000006595
UniProt: U3F2W6
Position
2:65401692..65408562
AA seq 622 aa
MEESEPERKRARTDEATAGGSRSEAEDEDDEDYVPYVPLRQRRQLLLQKLLQRRRKGAAE
EEQQDSGSEPRGDEDDIPLGPQSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESV
AEGRALMSVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPI
KSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVI
MFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGG
MSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRT
IFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAK
MVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRE
GKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKAC
DESVLMDLKALLLEAKQKVPPVLQVLHCGDESMLDIGGERGCAFCGGLGHRITDCPKLEA
MQTKQVSNIGRKDYLAHSSMDF
NT seq 1869 nt   +upstreamnt  +downstreamnt
atggaggagtcggaacccgagcggaagcgggctcgcaccgacgaggcgactgccggagga
agccgctccgaggcggaggatgaggacgacgaggactacgtgccttatgtgccgttacgg
cagcgccggcagctactgctccagaagctgctgcagcgaagacgcaagggagctgcggag
gaagagcagcaggacagtggcagcgaaccccggggtgatgaggacgacatcccgctgggc
cctcagtccaacgtcagcctcctggatcagcaccagcaccttaaagagaaggctgaagcc
cgcaaagagtctgccaaggagaagcagctgaaggaagaagagaagattctggagagtgtg
gctgagggccgagcattgatgtcagtgaaggagatggctaagggtatcacatatgatgac
cccatcaaaaccagttggactccgccccgttatgtcctgagcatgtctgaagagcgacat
gagcgtgtgcggaagaaataccacatcctggtggagggagacggtatcccaccacccatc
aaaagcttcaaggaaatgaagtttcctgcagccatcctgagaggcctgaagaagaaaggc
atccaccacccaacacccattcagatccagggaatccctaccattctatctggccgtgac
atgataggcatcgccttcacgggttcaggcaaaacactggtgttcacattgcctgtcatc
atgttctgcctggaacaagagaagaggctacccttctcaaagcgcgaggggccctatgga
ctaatcatctgcccctcacgagagctggcccggcagacccatggcatcctggagtactac
tgccgcctgctgcaggaagacagctcaccactcctgcgctgcgctctctgcatcgggggc
atgtccgtgaaagagcagatggagaccatccgacacggtgtgcacatgatggtggccacc
ccaggacgcctcatggatttgctgcagaagaagatggtcagtctagacatctgtcgctac
ctggccctggatgaggcagaccgcatgattgacatgggctttgagggcgacatccgcacc
atcttttcatacttcaagggccagcggcagaccctactcttcagtgccaccatgccgaag
aagattcagaactttgctaagagtgcccttgtaaagcctgttaccatcaacgtggggcgc
gctggggctgccagcctggatgtcatccaggaggtggaatatgtgaaggaggaggccaag
atggtgtacctgctcgagtgcctgcagaagacacccccacctgtgctcatctttgcagag
aagaaggcagatgtggacgccatccacgagtacctgctgctcaagggggttgaggctgta
gccatccatgggggcaaagaccaagaggaacggactaaggccattgaggcattccgggag
ggcaagaaggatgtcctagtagccacagatgttgcctccaagggcctggacttccctgcc
atccagcacgtcatcaattatgatatgccagaggagattgagaactatgtacaccggatt
ggccgcactgggcgttcaggaaacacaggcattgctaccaccttcatcaacaaagcctgt
gatgagtcagtgctgatggacctgaaagccctgctgctggaagccaagcagaaggtgcca
ccagtgctgcaggtgctgcactgtggggacgagtccatgctggatatcggaggagagcgt
ggctgtgccttctgtgggggcctgggccatcggatcaccgactgccccaaacttgaggct
atgcagaccaagcaggtcagcaacatcggccgcaaggactacctggcccacagctccatg
gacttctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (14)   
   RefSeq(nuc) (2)   
   GenBank (6)   
   EMBL (6)   
Protein domain (6)   
   Pfam (6)   
All databases (39)   

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