KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100405519
Entry
100405519         CDS       T03264                                 
Symbol
SNW1
Name
(RefSeq) SNW domain-containing protein 1
  KO
K06063  SNW domain-containing protein 1
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03040  Spliceosome
cjc04330  Notch signaling pathway
cjc05169  Epstein-Barr virus infection
cjc05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100405519 (SNW1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    100405519 (SNW1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    100405519 (SNW1)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    100405519 (SNW1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cjc03041]
    100405519 (SNW1)
Spliceosome [BR:cjc03041]
 Complex B
  Other components
   Prp19-related factors
    100405519 (SNW1)
 Complex C
    100405519 (SNW1)
SSDB
Motif
Pfam: SKIP_SNW Amidohydro_1
Other DBs
NCBI-GeneID: 100405519
NCBI-ProteinID: XP_002754208
Ensembl: ENSCJAG00000016947
UniProt: U3F5V0
Position
10:complement(108570777..108611507)
AA seq 536 aa
MALTSFLPAPTQLSQDQLEAEEKARSQRSRQTSLVSSRREPPPYGYRKGWIPRLLEDFGD
GGAFPEIHVAQYPLDMGRKKKMSNALAIQVDSEGKIKYDAIARQGQSKDKVIYSKYTDLV
PKEVMNADDPDLQRPDEEAIKEITEKTRVALEKSVSQKVAAAMPVRAADKLAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVERKMAQKEKEKHEEKLREMAQKARERRAGIKTHVEKEDGEARERDEIRHDRR
KERQHDRNLSRAAPDKRSKLQRNENRDISEVIALGVPNPRTSNEVQYDQRLFNQSKGMDS
GFAGGEDEIYNVYDQAWRGGKDMAQSIYRPSKNLDKDMYGDDLEARIKTNRFVPDKEFSG
SDRRQRGREGPVQFEEDPFGLDKFLEEAKQHGGSKRPSDSSRPKEHEHEGKKRRKE
NT seq 1611 nt   +upstreamnt  +downstreamnt
atggcgctcaccagctttttacctgcacctactcagctatctcaggaccagctagaggct
gaagaaaaggcaagatcccagagatcacggcagacctcattggtctcctcccgaagagag
cctcccccgtacggatatcggaaaggctggatacctcggttattagaggattttggagat
ggaggtgcttttccagagatccatgtggctcagtatccactggatatgggacgaaagaaa
aaaatgtcgaatgcactggccattcaggtggattctgaaggaaaaattaaatatgatgca
atcgctcgacaaggacagtcaaaagacaaggtcatttacagcaaatacactgacctggtt
ccaaaggaggttatgaatgcagatgacccagacctgcaaaggcccgatgaagaagctatt
aaagagataacagaaaagacaagagtagccttagaaaaatctgtatcacagaaggttgct
gcagccatgccagttcgggcagctgacaaactggctcctgctcagtatatccgatacaca
ccatctcagcaaggagtggctttcaactctggagctaaacagagggttattcggatggta
gaaatgcaaaaagatccaatggagcctccaagattcaagattaataagaaaattccccgg
ggaccaccttctcctcctgcacctgtcatgcattctcctagccgaaagatgactgtaaag
gaacaacaagagtggaagattcctccttgtatttctaactggaaaaatgcaaagggttat
acaattccattagacaaacgtctggctgctgatggaagaggactacagacagtacacata
aatgaaaattttgccaaactggccgaagccctctacattgctgatcggaaggctcgtgaa
gctgtggaaatgcgtgcccaagtagagagaaaaatggctcaaaaagaaaaggaaaaacat
gaagagaaacttagagaaatggcccagaaagccagggagagaagagctgggatcaaaact
catgtggaaaaagaggatggggaggcacgtgagagggatgaaatccggcatgacaggcga
aaagagagacagcatgaccggaatctttccagggcagctcctgataagaggtcaaaactt
cagagaaatgaaaatcgggatatcagtgaggtcattgctctcggtgttcccaatcctcgg
acttccaatgaagttcagtacgaccaaaggctcttcaaccaatccaagggtatggacagt
ggatttgcaggaggagaagatgaaatttataatgtttatgatcaagcctggagaggtggt
aaagatatggcccagagtatttataggcccagtaaaaatctggacaaggacatgtatggt
gatgacctagaagccagaataaagaccaacagatttgttcccgacaaggagttttctggt
tcagaccgtaggcagagaggccgagaaggaccagttcaatttgaggaagatccttttggt
ttggacaagtttttggaagaagccaaacagcatggtggctctaaaagaccctcagatagc
agccgccccaaggaacatgagcatgaaggcaagaagaggaggaaggagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (9)   
   RefSeq(nuc) (1)   
   GenBank (4)   
   EMBL (4)   
Protein domain (2)   
   Pfam (2)   
All databases (32)   

Download RDF
DBGET integrated database retrieval system