KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100407578
Entry
100407578         CDS       T03264                                 
Symbol
POLM
Name
(RefSeq) DNA-directed DNA/RNA polymerase mu isoform X1
  KO
K03513  DNA polymerase mu [EC:2.7.7.7]
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    100407578 (POLM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cjc03400]
    100407578 (POLM)
Enzymes [BR:cjc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     100407578 (POLM)
DNA repair and recombination proteins [BR:cjc03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     100407578 (POLM)
SSDB
Motif
Pfam: DNA_pol_B_thumb DNA_pol_lambd_f HHH_8 DNA_pol_B_palm NTP_transf_2 BRCT PUF Cdd1
Other DBs
NCBI-GeneID: 100407578
NCBI-ProteinID: XP_035109152
Position
8:complement(11352988..11363748)
AA seq 522 aa
MLPKRRRARVGSPSGDAASSALPSTRFPGVAIYLVEPHMGRSRRAFLTRLARSKGFRVLD
SCSSEVTHVVMEQISAEEAISWQERRMAAAPPGCSPPALLDISWFTESLAAGQPVPVECR
HRLEAFLPHQADDTATLSRMTHGSAGACPQDAVAGPGKGPPSPAWMPTYACQRPTPLTHH
NTSLTEALETLAEAAGFEGSEGRLLAFCRAASVLKALPSPVTTLSQLQGLPQLGEHSSRV
VQELLEHGVCEEVERVRSSERYQTMKLFTQVFGVGVRTADRWYREGLRTLDDLREQPQKL
TQQQKVGLQHHQDLSTPVLRSDVDALQQVVEEAVGQATPGATVTLTGGFRRGKLQGHDVD
FLITHPKEGQEAGLLPSVMHCLRDQGLILYHQHQHSRWESPTRLAQQSHMDAFERSFCIL
RLPQPPGAAVGGSPRSCPSWKAVRVDLVVVPISQFPFALLGWTGSKLFQRELRRFSRKEK
GLWLNSHGLFDPEQKTFLHAASEEDIFRHLGLEYLPPEQRNA
NT seq 1569 nt   +upstreamnt  +downstreamnt
atgctccccaaacggcggcgagcgcgggtcggctcccctagcggcgatgccgcttcctcc
gcgctgccttccacgcgcttccccggcgtcgccatctacctggtcgagcctcacatgggt
cgcagccgccgggccttcctcacacgcctggcccgctccaaaggcttccgcgtcctcgac
tcctgcagctccgaagtgacacatgttgtgatggaacagatctcagcagaggaggccatc
agctggcaggagcgcaggatggcagctgctcccccgggttgcagccccccagctctgctg
gacataagctggttcacagagagcctggcagctgggcagcctgtacctgtagagtgccgg
caccgcctggaggcctttcttcctcaccaagcagatgacacggcaactctgagtaggatg
acccatggatcagcaggagcctgtcctcaggatgctgtggccgggcccgggaagggacct
ccaagcccagcatggatgcctacctatgcctgccagcgccccacgcccctcacacaccac
aatactagcctcacagaggctctggagacactggcggaggcggcgggcttcgaaggcagt
gagggccgcctcctcgccttctgcagagcggcctcagtgctcaaagcccttcccagccct
gtcacaacactgagccagctgcaggggctgccccagcttggagaacactcctctagggtt
gtccaggagctgctggagcatggagtgtgtgaggaggtggagagagttcgaagctcagag
aggtaccagaccatgaagctcttcacccaggtcttcggggtcggtgtgaggactgctgac
cggtggtaccgggaaggactgcgaaccctggatgacctccgagagcagccccagaaactg
acccaacagcagaaagtggggctccagcaccaccaggacctgagcaccccagttctgcgg
tccgatgtagatgccctgcagcaggtggtggaagaagctgtggggcaggccacgcctggg
gccaccgtcacactgaccggcggcttccgcagggggaagttgcagggccatgacgtggac
ttcctcatcacccaccccaaggagggccaggaggcggggctgctgcccagcgtgatgcac
tgcctgcgggaccagggcctcatcctgtaccaccagcaccagcatagccgctgggagtcc
cctacccgcctggcccagcagagccacatggatgctttcgagaggagtttctgcatttta
cgcctaccacaacctccaggagctgctgtggggggatccccaaggtcctgcccatcctgg
aaggccgtgagggtggacttggtggtcgtacccatcagccagttccctttcgccctgctt
ggctggactggctccaagcttttccagcgggagctgcgccgcttcagccggaaggagaag
ggcctgtggctgaatagccatgggctgtttgacccggagcagaagacatttctccatgcg
gcttcagaggaagacatcttcagacacctgggccttgagtaccttcctccagagcagaga
aacgcctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (13)   
   RefSeq(nuc) (7)   
   GenBank (3)   
   EMBL (3)   
Protein domain (8)   
   Pfam (8)   
All databases (47)   

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