KEGG   Campylobacter jejuni subsp. doylei 269.97: JJD26997_1828
Entry
JJD26997_1828     CDS       T00573                                 
Name
(GenBank) ATP-dependent DNA helicase, UvrD/REP family
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
cjd  Campylobacter jejuni subsp. doylei 269.97
Pathway
cjd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cjd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    JJD26997_1828
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cjd03400]
    JJD26997_1828
Enzymes [BR:cjd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     JJD26997_1828
DNA repair and recombination proteins [BR:cjd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     JJD26997_1828
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_12 Viral_helicase1 PDDEXK_1 AAA_30
Other DBs
NCBI-ProteinID: ABS43542
UniProt: A7H5K2
Position
complement(1609304..1612069)
AA seq 921 aa
MSQFEPFLALEASAGSGKTFALSVRFVALILKGARINEILALTFTKKAANEMQKRIIEIF
LNLEKENKTSECNELCKLLGKDKEELISLRNAKKEEFLRTELKISTFDAFFGKILRVFAL
NLGLSSDFTMSEEKLDVREIFLKLLKKDELKDLAYYINLVDEKEIFFNELEKFYENAYFQ
NRPKIPNPSKAYINKAYSELRSYCLGLDHVKNYKNLCDNFKSEVLDLSVFMQSSFMTKFE
STKYLQDLESTNLHFSAKRMELINALNTYAIELENYKIANLMNLLNHYSEAKNIFHKDKN
TLNFQDVSKKVYELITSEFKDMIYFRLDGFISHLLIDEFQDTSVIQYQILRPLIAELVSG
EGVKKNRTFFYVGDKKQSIYRFRKGKKELFDLLKQEFGQIKSDNLNTNYRSKELLVDFVN
ETFKEKIKDYKEQFALESKKGGFVRIVESKEQKVKNQAQEIKEKTLEILFEQINFLRSKN
ISYDDICILCWKNSDVDMVLDFLREQKIPAFTQSNVLLENKASVRLVLEYAKYCIFGDEF
YLVFLKELLGFDPRKIALDFSKNAMENVLFLIKELKLDLNDIALIQFIEYAKTKENFLKL
LFEPCTLKIVSEQNMGVSIMSVHKSKGLEFDHVILLDSLSKNNSNNEDIMLEYDVNQGWQ
LHIKDKIRELTKEPIYTLFKENIIRANYEDDINKLYVAFTRAKESLIIVKRNEESVNGNY
PSYFKGGFLNIHSQERGYLESKEQILSVKKESIQALQKFEKITPQEIQSEERLDSKELYF
GNAFHFFMQNLKLPKGENFQILTQRCKSKFRHFLDESDFEKLFKRIEILLKNTQFQNLIG
DGKLLKEQALSFNGEIKQLDLLALKDEEAFIIDYKTGLAMQDKHKEQVRTYKIAISEILK
KDKVCAFIVYCLENEIQILEI
NT seq 2766 nt   +upstreamnt  +downstreamnt
atgagtcaatttgagccttttttggcattagaagcgagtgcgggaagtggaaaaaccttt
gctttgagtgtgcgttttgtagcacttattttaaaaggagctaggattaatgaaatttta
gctttaacttttaccaaaaaagctgctaatgaaatgcaaaaaagaattattgagattttt
ttaaatttagaaaaagaaaataaaaccagtgaatgtaatgaactttgcaagcttttaggc
aaagataaagaagagcttatttctttaagaaatgctaaaaaagaagaatttttaagaaca
gagttaaaaatcagtacttttgatgcttttttcggaaaaattttgcgtgtttttgcttta
aatttgggcttaagtagtgattttacaatgagtgaagagaagcttgatgtaagagagatt
tttttaaaacttcttaaaaaagatgaattaaaagatttggcttattatattaatttagtt
gatgagaaagaaattttttttaacgagcttgaaaaattttatgagaatgcttattttcaa
aatcgtcctaaaattccaaatccatctaaagcttatatcaataaagcttatagcgagtta
agaagttattgtttgggtcttgatcatgtaaaaaattataaaaatttgtgcgacaatttt
aaaagcgaagttttagatttatccgtgtttatgcaatcaagttttatgacaaaatttgaa
agtacaaaatatttgcaagatttagaaagcactaacttgcattttagtgcaaaaagaatg
gagcttataaatgctttaaatacttatgccatagagcttgaaaattataaaattgctaat
ttaatgaatcttttaaatcattatagtgaagctaaaaatatatttcataaagacaaaaat
accttaaatttccaagatgtgagtaaaaaagtttatgagctaataaccagtgaatttaag
gatatgatttattttcgtttagatggttttatttcgcatttgcttattgatgaatttcaa
gatacgagcgtgatccaatatcaaattttacgccctttgatcgctgagcttgtttcagga
gaaggagttaagaaaaatcgcacttttttttatgtaggagataaaaaacaaagtatttat
cgctttcgtaaaggaaaaaaagaattatttgatttgttaaaacaagaatttggtcaaatt
aaaagcgataatttaaatactaattatcgttctaaagagcttttggttgattttgttaat
gaaacttttaaagaaaaaatcaaagattataaagaacaatttgccttagaaagtaaaaaa
ggcggttttgtgcgtattgtggaatctaaagaacaaaaggttaaaaaccaagctcaagaa
atcaaggaaaagactttagaaattttatttgagcaaattaattttttaagatctaaaaat
atttcttatgatgatatttgtattttgtgttggaaaaatagcgatgtagatatggttttg
gattttttaagagagcaaaaaattcctgcgtttactcaaagcaatgttttacttgaaaat
aaagcaagtgtaagacttgttttagaatatgctaaatattgtatttttggtgatgagttt
tacttggtatttttaaaagaacttttaggttttgatccgagaaaaatcgcccttgatttt
tcaaaaaatgctatggaaaatgtactttttttaataaaagaattaaaacttgatttaaat
gatatcgctttaatacaatttatcgaatatgctaaaactaaggagaattttttaaagctt
ttatttgagccttgcactttgaaaatagtaagcgaacaaaatatgggtgttagtattatg
agtgtgcataaatctaagggcttggaatttgatcatgtgattttgcttgatagtctatct
aaaaacaattcaaacaatgaagatatcatgcttgaatatgatgtcaatcaaggttggcaa
ctgcatattaaagataaaattcgagagcttactaaagagcctatttatactctttttaaa
gaaaatattataagggcaaattatgaagatgatatcaataaactttatgtggcttttaca
agagctaaggaaagtttgattatcgtaaaaagaaatgaagaaagtgtaaatggaaattat
ccaagttattttaagggaggatttttaaatatacactctcaagagagaggttatttagaa
agcaaagaacaaattttaagtgttaaaaaagaaagcattcaagctttgcaaaaatttgaa
aaaattaccccacaagaaattcaaagcgaagaaaggcttgatagcaaagagctatatttt
gggaatgcttttcacttttttatgcaaaatttaaaactccctaagggtgaaaattttcaa
atacttactcaaagatgtaagagtaaatttaggcattttttagatgaaagtgattttgaa
aagctttttaaaagaattgaaattttacttaaaaatactcaatttcaaaatttgattggt
gatggaaagcttttaaaagaacaagctttgagttttaatggagaaattaaacaattagac
ttacttgctttaaaagatgaagaagctttcataattgattataaaacaggtcttgctatg
caagataaacataaagagcaggtaagaacttataagatcgctattagtgaaattttgaaa
aaagataaagtgtgtgcttttatagtttattgtttggaaaatgaaattcaaattttggaa
atataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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