KEGG   Campylobacter jejuni subsp. jejuni 00-2538: N565_01164
Entry
N565_01164        CDS       T02842                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
cjeu  Campylobacter jejuni subsp. jejuni 00-2538
Pathway
cjeu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cjeu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    N565_01164
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cjeu03021]
    N565_01164
   03019 Messenger RNA biogenesis [BR:cjeu03019]
    N565_01164
Transcription machinery [BR:cjeu03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     N565_01164
Messenger RNA biogenesis [BR:cjeu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     N565_01164
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_25 Spore_III_AA AAA OB_RNB ATPase_2 Mor ResIII AAA_22
Other DBs
NCBI-ProteinID: AGV49759
Position
1130343..1131641
AA seq 432 aa
MEKEKKQHQRTHVPVEGYKIEELKLLDLENLVKIANECEIENPREFRRQELIFEILKAQT
KKGGFILFTGILEISSEGYGFLRGMDSNLSDSVNDAYVSNSQIKKFALRVGDIVTGQVRE
PKDQEKYYALLKIEAINYLPLQEAKERPLFDNLTPIFPTEKIKLEYDAMKLTGRVLDLFT
PIGKGQRGLIVAPPRTGKTELMKELATAIAKNHPEMHLIVLLVDERPEEVTDMQRCVKGE
VFSSTFDLPAYNHVRVAELVIEKAKRMVETGKDVIILLDSITRLARAYNTATPSSGKVLS
GGVDANALHKPKRFFGAARNIENGGSLTIVATALIDTGSRMDDVIFEEFKGTGNSEIVLD
RNIADRRIYPAINIIKSGTRKEELLQGVANLQKIWAIRSAISQMDDVEALKFLYSKMLKT
KDNVELLSIMNE
NT seq 1299 nt   +upstreamnt  +downstreamnt
atggaaaaagaaaaaaaacaacatcaaagaacccacgttccagtggaaggttataaaatc
gaagaattaaaattattagatttagaaaatctagttaaaatcgctaatgaatgtgaaatc
gaaaacccaagagaatttcgccgccaagaacttatttttgaaattttaaaagcacaaaca
aaaaaaggcggttttatactttttacagggattttagaaatttcttccgaaggttatggc
tttttaagaggtatggactctaatcttagtgatagcgttaatgacgcttatgtttcaaac
tcacaaattaaaaaatttgctctgcgtgtaggcgatatcgttacaggacaagttagagaa
ccaaaagatcaagaaaaatactacgctcttttaaaaatcgaagcgatcaattatctgcct
ttacaagaagccaaagaaagacctttgtttgataacttaacccctatttttccaacagaa
aaaatcaaactcgaatacgatgcgatgaagcttacaggtcgtgttttggatctttttact
cctataggaaaaggacaacgcgggcttatcgttgctccaccacgcacaggtaaaacagag
cttatgaaagaacttgctactgctattgcaaaaaaccacccagaaatgcatttaatcgta
cttttagtcgatgaaaggcctgaagaagttaccgatatgcaaagatgtgtaaaaggcgaa
gtttttagttctacttttgatttacctgcttataatcatgtgcgtgtagctgaactcgtg
atagaaaaagccaaaagaatggtagaaacaggcaaagatgttatcatcttgcttgatagt
atcacaagactggcacgtgcttataacaccgcaactccaagcagcggaaaagtcctaagc
ggcggggtggatgctaatgccctacacaaaccaaaacgcttctttggtgcagctagaaat
atagaaaatggaggctctttaactatagttgctacagctttaattgatacaggttcaaga
atggatgatgtgatttttgaagaatttaaaggcacaggaaatagcgaaatagttcttgat
agaaatatcgccgatagaagaatttatcctgcgattaatatcatcaaatcaggaacaaga
aaagaagaattactccaaggcgtagcaaatcttcaaaaaatttgggcgatccgttcagcg
atttctcaaatggatgatgttgaagcgttgaaatttttatattctaaaatgcttaaaacc
aaagacaatgtagaacttttatctataatgaacgagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (19)   

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