KEGG   Campylobacter jejuni subsp. jejuni 00-1597: PJ17_08860
Entry
PJ17_08860        CDS       T03791                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
cjl  Campylobacter jejuni subsp. jejuni 00-1597
Brite
KEGG Orthology (KO) [BR:cjl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cjl03032]
    PJ17_08860
   03400 DNA repair and recombination proteins [BR:cjl03400]
    PJ17_08860
Enzymes [BR:cjl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     PJ17_08860
DNA replication proteins [BR:cjl03032]
 Prokaryotic type
  DNA Topoisomerases
   PJ17_08860
DNA repair and recombination proteins [BR:cjl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      PJ17_08860
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim Toprim_4 DUF1272 RNA_POL_M_15KD Toprim_2
Other DBs
NCBI-ProteinID: AJK71847
Position
complement(1708576..1710678)
AA seq 700 aa
MKKNLIIVESPAKAKTIGNFLGKDYEVIASKGHIRDLPKSSFGIKIEDDEFIPEYRITSD
HSALVKELKSKAKDAKEVYLATDEDREGEAIAYHIAKAIGKDENTLPRIVFHEITKSAIE
NALKNPRKLNMHSVNAQQTRRLLDRIVGYKLSPLLGQKIQRGLSAGRVQSAALKIIVDRE
KEIRAFVPLEYFSIDMIFQKDLDAELVEFDKAKIEKLTITNKDRAKLILEACKNEVYSIS
DIESKERKIAPPPPFMTSTLQQSASNRLGFNPKKTMMIAQKLYEGVNTHEGVMGVITYMR
TDSLNLAKEAVENARKFIQANFGKDYLPSKANVYTTKTKGAQEAHEAIRPTNLSFTPEIA
AKFLDKDELKLYTLIYNRFLACQMSPAISQTQNVFVKNDRAVFKISGRKILFDGYYKVYG
DMDKDKILPNFKIGQNLKVQNLEMNSHFTEPPSRYSEAGLVKKLESLGIGRPSTYAPTIS
ILTSRDYVTIDKKQLIPSDVAFNVTEVLEKNFSDIVDSKFTSNLENTLDEIAEDKADWQE
TLKEFYYPFMRKIEEGKTKIASQKTVTKLGESCPDCGGELAIRKGRFGEFVACLNFPKCK
YSRNLKGESKNESENTAAKAKANGTGITCPSCQKGEIVERFSKRGKFYGCSAYPKCNFIS
KYKPSEEKCEECGETLVIKELKKGTFLECLKCKIKKEMKD
NT seq 2103 nt   +upstreamnt  +downstreamnt
atgaagaaaaatttaatcatagtagaatctcctgcaaaagctaaaaccataggaaatttt
ttgggaaaagattatgaagttatcgcttctaaaggacatattagagatttgcctaaatca
agctttgggattaaaatagaagatgatgaatttatccctgagtatagaatcacaagtgat
catagcgccttagttaaagaacttaaaagcaaagccaaagatgccaaagaagtctatctt
gcaacggatgaagatagggaaggagaggctatagcctatcatattgcaaaagctatagga
aaagatgaaaacaccttaccacgcattgtttttcatgaaatcactaaaagcgctatagaa
aatgctttaaaaaatccaagaaaattaaacatgcactctgtaaatgctcagcaaaccaga
cgtcttttagatcgcattgtagggtataagctcagccctttattaggacaaaaaattcaa
agaggacttagtgctgggcgtgttcaaagtgcggctttaaagatcatagtcgatcgtgaa
aaagaaattcgtgcctttgtacccctagaatactttagtattgatatgatttttcaaaaa
gatttagatgcagaactagttgagtttgataaagccaagatagaaaaacttaccattacc
aacaaagatcgtgctaaacttatactagaagcttgtaaaaatgaagtttatagtataagt
gacattgaaagcaaagaaagaaaaatcgctccgccgcctccttttatgacttcaacttta
caacaaagtgccagcaatcgccttggttttaaccctaaaaaaaccatgatgatagctcaa
aagctctatgaaggagtaaatacccatgaaggcgtgatgggggttattacttatatgaga
accgatagtttaaatttagccaaagaagcagtagaaaatgcaagaaaattcatacaagca
aattttggcaaagactatcttccaagcaaagcaaatgtatatactacaaagactaaaggc
gctcaagaagctcatgaagctatacgccctacaaatttaagttttactccagaaattgcg
gctaaatttttagacaaagatgagttaaaactttacacacttatttacaatcgcttttta
gcctgtcagatgagtcctgctatctctcaaactcaaaatgtatttgtaaaaaatgataga
gcagtttttaaaataagcggtagaaaaatcctttttgatggatattataaagtttatggt
gatatggataaggataaaattttgccaaattttaaaataggccaaaatttaaaagtgcaa
aatttagaaatgaactcacattttaccgaaccaccttcaaggtattcagaagcaggactt
gtaaaaaaacttgaaagtttaggcataggtcgcccttctacttatgcaccaaccatttct
atacttacaagccgtgattatgtaacaatagataaaaaacaactcattcctagcgatgtt
gcttttaatgtaaccgaagtgcttgagaaaaattttagcgatatagtagatagtaaattt
acttcaaaccttgaaaataccctagatgaaatcgcagaagataaggcagattggcaagaa
actttaaaagaattttactatccttttatgagaaaaatcgaagagggaaaaacaaaaata
gctagtcaaaaaactgtcacaaaactaggcgaaagttgtcctgattgtggcggagagctt
gctattagaaaagggcgttttggagaatttgtagcgtgtttaaatttcccaaaatgcaag
tattcaagaaatttaaaaggtgaaagcaaaaacgaaagcgaaaatacagccgcaaaagct
aaagctaatggtacaggcattacttgtccaagttgtcaaaaaggtgaaatcgtagaacgc
ttttcaaaacgtggtaaattttatggctgtagtgcttatccaaaatgcaattttataagc
aaatacaaaccaagtgaagaaaaatgcgaagagtgtggcgaaactttagtgataaaagag
cttaaaaaaggtacattcttagaatgtttaaagtgtaaaatcaaaaaagaaatgaaggat
tag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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