KEGG   Coturnix japonica (Japanese quail): 107309129
Entry
107309129         CDS       T04297                                 
Symbol
SEM1
Name
(RefSeq) 26S proteasome complex subunit SEM1
  KO
K10881  26 proteasome complex subunit DSS1
Organism
cjo  Coturnix japonica (Japanese quail)
Pathway
cjo03050  Proteasome
cjo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cjo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    107309129 (SEM1)
  09124 Replication and repair
   03440 Homologous recombination
    107309129 (SEM1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cjo03019]
    107309129 (SEM1)
   04131 Membrane trafficking [BR:cjo04131]
    107309129 (SEM1)
   03051 Proteasome [BR:cjo03051]
    107309129 (SEM1)
   03400 DNA repair and recombination proteins [BR:cjo03400]
    107309129 (SEM1)
Messenger RNA biogenesis [BR:cjo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     107309129 (SEM1)
Membrane trafficking [BR:cjo04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    107309129 (SEM1)
Proteasome [BR:cjo03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     107309129 (SEM1)
DNA repair and recombination proteins [BR:cjo03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     107309129 (SEM1)
SSDB
Motif
Pfam: DSS1_SEM1
Other DBs
NCBI-GeneID: 107309129
NCBI-ProteinID: XP_015709144
Position
2:complement(22205660..22211070)
AA seq 70 aa
MSEKKQPVDLGLLEEDDEFEEFPAEDWTGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAEL
EKHGYKMETS
NT seq 213 nt   +upstreamnt  +downstreamnt
atgtcggagaaaaagcaaccggtggatttggggctcctggaggaggacgacgagttcgag
gagtttccggctgaagattggactggtttagacgaagatgaagatgcacatgtctgggaa
gacaattgggatgatgacaacgtagaagatgatttctccaatcagttaagggctgaatta
gaaaaacatggatacaagatggaaacttcatag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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