KEGG   Coturnix japonica (Japanese quail): 107316017
Entry
107316017         CDS       T04297                                 
Symbol
COL17A1
Name
(RefSeq) collagen alpha-1(XVII) chain
  KO
K07603  collagen type XVII alpha
Organism
cjo  Coturnix japonica (Japanese quail)
SSDB
Motif
Pfam: Collagen DUF2868
Other DBs
NCBI-GeneID: 107316017
NCBI-ProteinID: XP_015722519
Position
6:complement(21172945..21212560)
AA seq 1497 aa
MDSVTKKTRQDGSEVTERLITETVTTRLTSLPPKGGSSSGLKTSSHTGGSGVEKRSYTHS
SSYVTSSGSGRLNSSSSGYRQTQSPSSTLTKSPGSTFERKTYVNRHATYEGSSSANSSPE
FPRKEFASASTRGRSQSRESEIRVRLQSASPSGRWTELDDVKRLLKGSRSASCSPTRSSS
STLPIPKKAVVETKMVTESSQSVSGTYDTTILNTALPPYTWSSTLPAGSSLGGYHNSMGQ
SSSLINAMSHSTGSVFGVPNNLAPSSHALNTGLSTSSTVFGVQNNLSPSSSALNATAASA
AYGVKNTSQTNTMNSTGVSASAGGTILSTQGDDFLRKDCKFLLLEKENAPAKKDMELLVM
SKDSGKVFSASSTGLNGGSFAEDTLKKEKQGLSSYTADTGLKSDANGGLKSAATRDKETY
AEIRNGDAGGAVGSAPSWCPCGSCCSWWKWLLGLLLAWLLLLGLLFGLIALAEEVRKLKS
RVDNLEKINHSFLTVNQGNPYLEKDASKAEFVRGAAPSSAFSFENEESVWLMVKSRLNKE
IERGYFRGERGEPGMKGDMGPKGDRGLPGVPGIPGPAGHQGPEGPKGQKGSMGDPGMEGP
IGQRGREGLPGPRGEPGPPGFGEKGDRGAAGPPGPPGPPGSAGLKGPMGSPGPQGPPGPP
GLQGFRGEAGLPGAKGEKGATGSQGPKGDQGEKGARGMTGEQGSRGIPGPPGEPGPKGPA
GQAGRDGQPGEKGEPGLMGMPGARGPPGPSGDAGEPGLTGPQGPPGLPGNPGRPGAKGEP
GAPGKVISAEGSSTIALPGPPGPPGPMGPTGPPGVPGPVGPAGLPGQQGPRGEKGSAGEA
VIETIKTEVSQMASQMLSDLQGRAGPPGPPGPPGESVQGLPGPRGPPGLPGPSGPPGRPG
SSMSTSEAFVSGPPGPPGPPGPKGDQGEPGPRGFTGEPGEPGLPGFSSHGGTVTMQGPPG
PPGPPGPKGDAGVPGAPGIPGTSRGGSRQIQGPPGPPGPPGPPGPGGSSSQEIQQYVTDY
LKSDNVRHYLAGVQGPPGPPGPPGILTTADGKTFDFAELATRVMSYMTSSSDHYESFASS
VSTTSVLYRELLDMLQREEIRQYLVGPRGPPGPPGPGVDGMSLSLDYDELTRRFISYLTS
SGMSIGLPGPPGPPGSPGISYSELTAYLRNSEFSGLVGPPGPAGPPGPPGIPGSSGTSLE
DISAYLQSVGYSSISGIQGPPGPPGPPGPPGFSGTGLLSYADITHSDEFRSELIQYLKSD
EVRSYISGPPGPPGPRGPPGPKGDSGLVAGSMSSLYHDSLASERLHGGSIGAEGSLGGSL
GAGSSYGSSMSSSMSSYSASMGSDGSFDGLLTAEESYRRSAGPGRSYSSSFTGSLDYNEL
ARHVSENLQSRGILQDLMSYTGQGPPGPPGPPGPPGVSRVFAAYGNVTEDLMDFFRTHGT
VRGPPGEKGERGYPGPKGDPGPMGPPGRHGQRGPKGEKGEKGEQVYGGRRKRRSVGV
NT seq 4494 nt   +upstreamnt  +downstreamnt
atggattctgtaacgaagaaaacgaggcaagatggatcagaagttacagagagacttatt
acagagacagtaactacaagactgacatctttaccacccaaaggagggagcagtagtgga
ctcaagacatcgtcccacactggaggaagtggagtagaaaagaggtcttacacccatagc
agcagctatgtgacttcaagtggaagtggtagattgaattcatcatcgtctggctacaga
caaacacagtctcctagctcaactctcaccaaatcacctggctcaacatttgaaagaaaa
acctatgtcaaccgccatgcaacatatgaagggagctccagtgctaactcttctccagag
ttccccaggaaagaatttgcatctgcatccacacgagggcgaagccaaagccgagagagt
gaaatacgagtacggctgcagagtgcatctccctctggcagatggacggagttggatgat
gtaaaacgtttactgaaaggaagtcgatcagccagctgcagccctactcgatcatcatca
agtaccctcccaataccgaaaaaagctgtggtggagacaaaaatggttactgagagctct
cagtcagtgtcggggacatatgatacaactatactaaatacagccctccctccatacaca
tggtcctcaactctgcctgctgggtcttcccttggaggataccataacagcatgggccag
agctcctccttgatcaatgctatgtctcactctacaggatcagtttttggtgttccaaat
aacctggctcctagcagtcatgctctgaacacaggcctgagcacttcctcaacagtgttt
ggagttcaaaacaatctgtcaccaagctcttcagccctgaatgccactgcagcttctgca
gcatatggggtgaagaacacttctcagacaaacaccatgaatagtactggtgtctctgcc
tcagcaggtgggaccatcttgagcacccagggagatgacttcctgcgcaaagactgcaag
ttcttgctgctagagaaggagaatgccccagcaaagaaggatatggagctcttagtcatg
tcaaaggatagtggcaaagtctttagtgcctcttccactgggcttaatggaggatccttt
gcagaagacaccttgaagaaagaaaagcaggggctttcctcttacacagcagatactggc
ctgaaatcagatgcaaatggaggactgaaatcagcagcgacaagggacaaagaaacatat
gcagaaataaggaatggtgatgcagggggtgcagttggatcagcaccatcctggtgtccc
tgtggttcctgctgtagctggtggaaatggctcctgggtttgcttctggcatggctgctt
ctccttggattactctttggactcattgctctggcggaagaagtgagaaaactgaaatct
cgtgtggataacctggaaaaaataaatcacagcttcctgacagtcaaccaaggaaatccg
tatttagaaaaagatgcttctaaagcggagtttgttcgtggtgcagcaccatcttcagct
ttctcttttgaaaatgaagaatctgtttggttgatggtgaagagcagactgaacaaggaa
atagaacgaggctacttccgaggagagagaggagaacctggtatgaaaggtgacatgggt
cccaaaggggatcgaggacttcccggtgtcccaggcattcctggtccagcggggcaccaa
ggaccagaaggaccgaaaggacagaagggcagcatgggtgatcctggcatggaaggtccc
ataggacaaagaggtcgagaagggctgccagggcctcgaggagagcctggaccacctgga
tttggagaaaaaggagacagaggtgctgcaggtcctccagggccacctggtcccccaggt
tctgctggccttaaaggtccaatgggttctccaggccctcaaggtcctccaggtcctcct
ggccttcaaggatttagaggagaagcaggtctcccaggtgctaaaggtgagaaaggagct
actggatcccaaggacccaaaggtgatcagggtgagaaaggagctcgtggaatgacaggt
gaacaaggctcaagaggtatacctggtcctccaggagagccagggcctaaaggacctgca
ggacaagctggccgtgatggacagccaggtgaaaaaggtgaaccaggtctcatgggaatg
ccaggagcccgaggccctccaggtccttctggagatgcaggagagccaggtctcacagga
ccccaaggaccaccaggacttccaggcaacccaggcagaccgggggctaaaggagaacct
ggagctccaggcaaagtcataagtgctgagggttcatcaactattgctctaccaggtcca
ccaggtcctccaggaccaatgggccccactggaccccctggtgttccaggtcctgttggg
ccagctggtctccctggacaacaaggtccacggggtgagaagggatctgcaggtgaagct
gtgatagaaactataaagactgaagtctcacaaatggcatctcagatgctgtcagatcta
caagggcgagcaggaccaccaggtccccctggaccaccaggtgaatctgtgcagggactc
cctgggcctcgtggtcccccaggattgccaggaccttcaggcccaccagggagaccagga
tcttccatgtccacctcagaagcatttgtctctggaccacctggaccaccaggtccacca
ggccccaagggagaccaaggtgaaccaggtccacgaggattcacaggtgaaccaggtgaa
cctggccttccaggattctcttcccatggtggtacagtcaccatgcagggacctccaggc
ccaccaggcccaccaggacctaaaggtgatgcaggtgtcccaggcgctcctggcatccca
ggaacatctagaggtggatccagacaaattcagggacccccaggtcctcctgggcctcct
ggtcctcctggcccagggggaagttcctctcaagagattcagcagtatgtcactgattac
ctgaaaagtgataatgtacggcattatttggctggtgtccaaggtcctccaggtcctcca
ggcccacctggaatcctcaccactgcagatggaaagacctttgattttgcagagctggct
acccgtgttatgagctatatgacaagctcttcagatcattatgaatcatttgccagttca
gtatcaactacatctgttttgtaccgagaacttttggacatgctgcagagagaagaaatt
cgtcagtatctagttggacctcggggcccaccaggacctcctggaccaggagtagatgga
atgtctctgtcactggattatgatgagttgaccagacggtttattagctacttgacaagt
tctggtatgagcattgggctccctggaccacctgggcctccaggatcaccaggaatatct
tacagtgaactgacagcatacctgagaaactctgaattcagtggtcttgttggaccccct
gggcctgcagggcccccaggacccccagggatccctggatcatctggcacctctctggag
gacatctctgcttacctacaaagtgttggatattcttctatctctggcatccagggccca
cctggccctcctggccctccaggaccaccaggcttctcaggaactggcctcctgtcctat
gctgacatcacccacagtgacgagttcaggagtgagctgatccagtacctgaaaagtgat
gaggttcgaagctacatctcagggccgcctgggcctcctgggccacggggaccaccagga
cccaaaggagatagtggtttggtggctgggtctatgtcttcattataccatgattcactg
gcttctgagaggttgcatggaggatcaattggtgctgagggatcccttggaggatcactt
ggagcaggcagctcttacggcagctccatgagcagcagcatgtcatcatacagtgcctcc
atgggcagtgatgggtcatttgatgggctgctgacagctgaggagtcatacaggcgatca
gcaggtccaggcagatcttatagcagctcctttactggatctctggattacaacgaactg
gctcgacatgtgtcagagaacctacaaagccgaggtattctccaggacttaatgtcttac
actggacaggggcctccaggccccccaggacctcctggccctcctggagtaagcagagtc
tttgcagcctatggtaatgtcactgaggacctcatggacttcttcagaacacacggtact
gtccggggacctcctggtgagaaaggagagcggggttatcccggccccaaaggtgatcct
gggccgatgggcccaccaggacgccatgggcagaggggaccaaaaggagagaaaggcgag
aaaggtgaacaagtgtatggtggcagaaggaaaagaagaagtgttggagtttaa

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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