KEGG T04297: 107318839

Coturnix japonica (Japanese quail): 107318839

Entry

107318839         CDS       T04297

Symbol

CHD2

Name

(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1

K20091

chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]

Organism

cjo Coturnix japonica (Japanese quail)

Brite

KEGG Orthology (KO) [BR:cjo00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cjo03036]
    107318839 (CHD2)
Chromosome and associated proteins [BR:cjo03036]
Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    107318839 (CHD2)

SSDB

Motif

Pfam:

SNF2-rel_dom CDH1_2_SANT_HL1 Helicase_C Chromo CHD1-like_C ResIII HDA2-3 Myb_DNA-binding DTHCT CHDCT2

Other DBs

NCBI-GeneID:

107318839

NCBI-ProteinID:

XP_015728590

Position

10:13066172..13166631

AA seq 1909 aa
MCPLGAWMERVPTPPLCSQLGLPWGWNATAPCGRITWFCQRRRTWVQVWTNQVLASSYPK
TGVMLLAPFSTKLSMVSLRCSGDLVYAGSSESHSASEEASGSDSASQSESEQGSEQGSES
NSSSESSESQSESESESTGSKSQQTPPETKEKPASKKERIADVKKMWEEYPDVYGVRRSN
RSRQEPSRFNIKDEASSESENESPKRRGQKQVKRKKKWKREISGEEEDEDGGDQGTSAES
EPEPKRIKAKRPVQRRAMAKTSVKKPPKLQRGKKRKRQVSSEDDDDDEDGETPKRQTRRR
AAKNVSYKEDDDFETDSDDLIEMTGEGADEHEDNSETIEKVLDIRLGKKGATGASTTVYA
TEANGNPSADFDPEKDEGEVHYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKE
EEIKQWLAKVSPEDVEYFNCQQELASELNKQYQIVERVIAVKTSKTATGHADFPANSRKT
SSNDPEYLCKWMGLPYAECSWEDEALISKKFQHCIDSFNNRNNSKTIPTRDCKVLKQRPR
FVALKKQPSYIGSENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYL
FHQHQLYGPFLVVVPLSTLTSWQREFEVWAPEINVVVYIGDLMSRNMIREYEWIHSQSKR
LKFNALITTYEILLKDKAVLGSISWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITG
TPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDVE
KSLPAKVEQILRVEMSALQKQYYKWILTRNYKALSKGTRGSTSGFLNIVMELKKCCNHCY
LIKPPEENERENGTETLQSLIRSSGKLILLDKLLTRLRDRGNRVLIFSQMVRMLDILAEY
LTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFD
SDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTT
GRTVLDNNSGRSNSNPFNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAETRE
NEVSTSATDELLSQFKVANFATMEEEETELDERPQKDWDDIIPEEQRKKVEEEERQKELE
EIYMLPRIRSSTKKAQTNDSESDAETKRRLQRSSGSESETDDTDDEKRPKRRGRPRSVRK
DTVEGFTDAEIRRFIKAYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCVSAM
QEYEEQLKENPGETGKGPGKRRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPADPEERK
KYRLTCRVKAAHFDVDWGVEEDSRLLVGIYEHGYGNWELIKTDPELKLSDKILPVETDKK
PQGKQLQTRVDYLLKLLKKDLEKKENMKDGEEGKLKKRKPRVKKENKAPKVKDEHGNELS
PPRHSDNQSEEGEVKDDGLDKSPVKKKQKKKENKENKEKQTSTKKEKESDKEKKRTKEKK
EKPKGGEAKSGSKGKRSQGPVHITAGSEPVPIGEDEDDDLDQETFSICKERMRPVKKALK
QLDKPDKGLTVQEQLEHTRNCLLKIGDRISECLKAYTDQDLIKLWRRNLWIFVSKFTEFD
ARKLHKLYKMAHKKRSQEEEEQKKKEDMASMPSMKKPFRPEPSGSSRDPTMSQSHVPHNP
HSQKLHMPPSHAQQQMHGHPRESYGHPPKRHFSNTDRGEWQRDRKFSYSGNSNQMWGGER
HHQYEQHWYKDHHYGDRRSRGDPHRSSGNYRPNNLSRKRPYEQYSSDRDHRGHRDYYDRH
HHDSKRRRSDEFRPQNYHQQDFRRMSDHRPPMGYHGQGPSDHYRSFHTDKPGDYKQPLPP
PHPSVSDPRSPPSQKSPHDSKSPLDHRSPLDRSLEQKNNPDYNWNMRKT

NT seq 5730 nt +upstreamnt +downstreamnt
atgtgcccactgggtgcatggatggaacgtgtcccaacccctccgctttgttcccagctg
gggttgccatggggctggaatgcaactgccccttgtggcaggatcacttggttctgccag
aggaggaggacatgggttcaggtgtggacaaaccaagtgctggcttcatcctaccccaaa
accggagtcatgctgctggcccctttctccactaagctaagcatggtgtccttgcgctgt
tctggtgacctagtttatgctggctcgagtgaaagtcactcggcatccgaagaagcctct
ggctctgactctgcaagccagtctgagagtgagcagggcagcgagcagggcagcgagtct
aacagcagctccgagtcctctgaaagtcagtctgaatccgaaagtgaatcaacgggttcg
aaatcccagcagacccctcctgaaaccaaagaaaaaccagcctctaagaaggaaaggata
gcagatgttaaaaagatgtgggaagaatatcctgatgtttatggggttaggaggtcaaac
cgaagcagacaagaaccgtcacgatttaatataaaagatgaggcaagtagcgaatctgaa
aatgagagcccaaaaagaagaggccagaagcaagtgaaaagaaaaaaaaagtggaaaaga
gagatttctggtgaagaagaggatgaagatggaggggatcaagggaccagtgcagagagt
gagcctgaaccgaagagaattaaagcaaaaagacccgtccaaaggagagcaatggccaaa
accagtgttaaaaaacctcccaaactccagcgtgggaagaagagaaagagacaggtgtca
tctgaagatgacgacgatgatgaagatggtgaaactcccaagagacaaactcgacgaaga
gcagccaaaaatgtcagttacaaggaggacgacgattttgagaccgattctgatgacctg
atagagatgactggggaaggggctgatgaacacgaagacaacagtgaaactattgaaaaa
gtcttggacatcaggcttggaaaaaaaggagccactggcgcttccaccacagtgtatgca
actgaagccaatggcaaccccagcgctgactttgaccctgaaaaagatgagggagaggtt
cattacctgatcaaatggaaaggctggtcgtacatccacagcacgtgggagagtgaggag
tccctgcaacagcagaaagtgaagggcctgaaaaaactagaaaacttcaagaaaaaggag
gaggagatcaagcaatggctggccaaggtatcgcctgaagatgtggaatatttcaactgc
caacaggagctggcttcagagctgaacaaacagtatcaaattgtggagagagtaattgct
gtgaagaccagcaagactgcgacggggcatgctgacttcccagcaaacagtcgcaaaaca
tcctcaaatgaccccgaatacctgtgcaagtggatggggctgccctatgcagagtgcagc
tgggaagatgaagctctaataagcaagaaatttcagcactgcattgacagcttcaacaac
cgtaacaactccaagacgattcctacccgggactgcaaggtattgaagcagagaccaaga
tttgttgccttgaagaaacagccttcttatattggcagtgagaacctggagctgcgagat
taccagctggagggcctcaattggctggctcactcgtggtgcaagaacaacagtgtgatc
ctggctgatgaaatgggcctggggaagacgattcagacaatctcattcctgtcgtacctt
ttccaccagcaccagctgtacggtcccttcctggtggtggttcctctgtcgactctcacc
tcgtggcagagagagtttgaagtgtgggcacctgagatcaacgtggtggtttacatcggt
gacctcatgagcaggaacatgatacgtgagtatgagtggatccactctcagtctaaaagg
ttgaaattcaacgcgcttatcacaacatatgagatcctcctcaaagacaaggctgttttg
ggaagtattagctgggcctttctaggcgtggatgaagcccatcgtttgaaaaatgatgac
tctttgctgtacaaaacactgattgacttcaagtccaaccacaggctgctgatcactggc
actccgcttcaaaattcactcaaagagctctggtccctgctgcatttcatcatgcctgag
aagtttgagttctgggaagattttgaagaagatcatgggaaaggtagagaaaatggctac
cagagccttcacaaagtcctggagccgtttctcctacgcagagtgaagaaggatgtagag
aaatctttgccagccaaagtggagcagatcctccgtgtggaaatgtctgctttgcagaag
cagtattacaagtggattctgacaagaaactacaaggctctttcaaagggaacaagagga
agcacgtctggtttcttaaacatcgtgatggagttgaaaaagtgctgcaaccactgctac
cttatcaaacctcccgaggaaaatgagagagagaatggcactgagaccctgcagtctctg
attaggagcagtgggaagctaattctcttggacaagctgctgaccaggctgcgggacaga
ggcaacagagtcctgatcttctcccagatggtgaggatgctggacatcttggcagagtac
ctgactatcaaacactatcctttccagcgcttggacggctcaatcaaaggggagatccga
aagcaggcgctggaccatttcaacgccgacggctctgaggacttctgtttcttgctgtca
acacgagctggagggctgggaattaatttggcctctgctgatactgttgttatctttgat
tcggactggaacccccagaatgatcttcaggctcaggctcgggctcatcgcattggacaa
aagaaacaggtgaatatttaccgcctggtcacaaagggtacagttgaggaggagatcatt
gagagggccaagaagaaaatggtgctggatcatttggtgatccagcgtatggacaccact
ggacggactgttctggacaacaactctggacgatccaattcaaatcctttcaacaaagaa
gagttgacagctattttgaagtttggagctgaagatctctttaaggagcttgaaggggaa
gagtcagagcctcaggagatggacattgatgagattctgcgtttggctgaaacacgagag
aatgaagtgtccaccagtgccactgatgagctgctttcacagttcaaggtggcgaacttt
gcaaccatggaggaggaagagacagagttggacgagcggccccagaaggactgggacgat
atcattccagaggagcagaggaagaaagtggaggaggaagaaaggcagaaagaattggag
gaaatctacatgctgcctcgcatccggagctcaacgaaaaaggctcaaacgaacgacagt
gaatcagatgcagagacaaagagaaggcttcaaagatcatcggggtcagaaagtgagact
gatgataccgatgatgagaagagaccaaagcgccgtggacgccctcggagcgttagaaaa
gatactgtggaaggatttactgatgctgaaatccggaggtttatcaaggcttacaagaag
tttggactgcctcttgagcggctggagtgcattgccagggatgctgagctggtggacaag
tctgtggctgatctgaagcgtttaggagaactcatccacaacagctgtgtgtcagcgatg
caggaatatgaggagcagctgaaagaaaacccaggtgaaacaggaaaaggacctgggaaa
agaagagggcctaccatcaagatctctggtgtccaagtgaatgtgaaatccatcatccag
cacgaagaggagtttgaaatgctgcataaatccatccctgcagacccagaagaaaggaag
aagtaccgcctgacgtgccgtgtcaaagctgcccattttgatgtagactggggagtggag
gaggattctcgcttgttagtgggaatttacgagcatggttatggaaactgggaactaatt
aaaacagatccggaattgaagttatctgataagatcctgcctgttgagacagataagaaa
cctcagggaaaacagctccagacccgagttgattatctactgaaactgctgaagaaggat
ctggagaagaaagaaaatatgaaagatggggaagagggcaagctaaagaagaggaaacca
cgagtaaagaaagagaacaaggctcccaaagtcaaagatgagcatgggaacgaactctcc
cctcctcggcactcagacaaccagtcagaagaaggtgaagtcaaggatgatggcttggac
aagagcccagtgaaaaagaaacagaagaagaaagagaacaaagagaataaggaaaaacag
acaagcactaagaaggagaaggaaagtgataaagagaaaaagaggacaaaagagaagaaa
gagaagcctaaaggtggtgaagccaaatctggaagtaaagggaagagatcacaaggtcct
gtccacattacagcagggagtgaaccagtccccattggagaagatgaggatgatgatctg
gaccaagaaacattcagcatatgcaaggaaaggatgagaccagtaaaaaaagcactgaag
caacttgataagcctgataagggactgacggttcaagaacagctggagcacacacgcaac
tgcctcctaaaaattggggaccgcatctctgagtgccttaaagcctacactgaccaggat
cttatcaagctatggagaaggaacctatggatatttgtctccaagttcacagaattcgat
gccagaaaactgcacaaactctacaagatggctcataagaaaagatcgcaggaagaggag
gagcagaaaaagaaagaggacatggccagcatgcccagcatgaagaagccgttccgccca
gagccttcgggctccagccgtgatcccaccatgtcccagtctcacgtgcctcacaatcct
cattcccagaagctccacatgcccccttcccatgcccagcagcagatgcacgggcaccca
cgtgaaagctatggccatccccccaagagacacttcagcaacacggaccgaggagagtgg
cagcgagatcgaaagttcagctatagcggcaacagcaaccagatgtggggtggggaacgg
catcaccaatatgagcagcactggtacaaggaccaccactatggggaccggcgatctcgc
ggagacccccaccggagctctgggaactacagaccaaataacctctcccgcaagaggccg
tacgagcagtacagcagcgaccgagaccatagaggccaccgggattattatgacaggcac
caccacgactccaagcgccggcgatccgatgagttcaggcctcagaattaccaccagcag
gatttccgacggatgtctgatcacaggccgcccatgggataccatggccaaggaccttcg
gaccactacaggtccttccacacagacaaaccgggagactacaaacagccccttcctcca
cctcacccttcagtgtcggaccctcgctcgcccccctctcagaaatctcctcatgattcc
aagtcgcctctcgatcacaggtcgcctctggataggtcgctagaacagaaaaacaatcca
gactataactggaacatgaggaaaacgtaa

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (11)   
   RefSeq(pep) (11)   
DNA sequence (11)   
   RefSeq(nuc) (11)   
Protein domain (10)   
   Pfam (10)   
All databases (39)   

Download RDF

DBGET integrated database retrieval system