KEGG   Campylobacter jejuni subsp. jejuni YH001: QZ67_00844
Entry
QZ67_00844        CDS       T03744                                 
Symbol
uvrD
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
cjy  Campylobacter jejuni subsp. jejuni YH001
Pathway
cjy03420  Nucleotide excision repair
cjy03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cjy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    QZ67_00844 (uvrD)
   03430 Mismatch repair
    QZ67_00844 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cjy03400]
    QZ67_00844 (uvrD)
Enzymes [BR:cjy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     QZ67_00844 (uvrD)
DNA repair and recombination proteins [BR:cjy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     QZ67_00844 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     QZ67_00844 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_11 ResIII AAA_30
Other DBs
NCBI-ProteinID: AJA54945
Position
765156..767186
AA seq 676 aa
MPLSKLNNEQYLAATADFGHNLVIASAGTGKTSTIVARISYLLSKGVAPQKIMLLTFTNK
ASKEMIGRLGKFFDKNITSKILAGTFHSTAYTLLRNADKNIALKQASELKTLLKSVYEKR
TFRHLSDIKPYQSSYLYDLYSLFQNKAHNQDFYTWFCQNYEDQSIYAEIYEDILKEYDNE
KKRFNYVDFNDLLINLKDLLKEEKYEFDEILVDEYQDTNTLQSSLIEAFHSKSLFCVGDY
DQSIYAFNGADINIIGGFKDRFKDAKIFSLNKNYRSSRSILALANKVILNNERLYPKELI
VTRNDEFKAPSLLTFEELFDQYQNIAKMILTSGVSLEEIAVIFRNNSSADGVEVALREQG
IASVRKGSGSFFESLEVKAFSSMLALVVNPKDIMAFIHLVQYTKGVGGVLAKEIFDALLK
LGHGNLIKGFLDPDKNVNLQNHQKRNYQLGLFADLEELASETRFKFESEFDAHPILRLSK
INDLCARNLEKIYLFLKKAMEIKHSLTLVNLICENSFYREICEELATKRATNKAGQVDLL
RKSENLEKIETKFNVLKELTKNYSDIYKYYNFLTLGASEMSSGKGVNLLSVHASKGLEFD
LVFVIDLAQGRFPNQKLMGMGGSLEEERRLFYVAVTRAKNILYLSYAKYDKNKKTSFAPS
RFLIEAGLCKGELTID
NT seq 2031 nt   +upstreamnt  +downstreamnt
atgccactttcaaaattaaataatgaacaatatcttgccgctactgctgattttggacac
aatcttgttattgcaagtgcagggacgggaaaaacttctactattgttgcaagaatttct
tatcttttaagcaagggagtggcacctcaaaaaatcatgcttttgactttcacaaataaa
gccagcaaagaaatgatagggcgtttagggaaattttttgataaaaatattaccagtaaa
atacttgcaggaacttttcatagtacggcttataccttacttagaaatgcggataaaaat
atagccttaaagcaagcaagcgagttaaaaactctacttaaaagtgtctatgaaaaaaga
acttttaggcatttaagtgatataaaaccttatcaatcaagttatttatacgatctttat
tctttgtttcaaaacaaagcacacaatcaagatttttatacttggttttgtcaaaactat
gaagatcaaagtatttatgctgaaatttatgaagatattttaaaagaatatgataatgaa
aaaaagcgttttaattatgtggattttaatgacttgcttatcaatctaaaagatctttta
aaagaagaaaaatatgaatttgatgaaattttagtagatgaatatcaagacacaaatact
ttgcaaagttctttaatagaggcttttcatagtaaaagtttgttttgcgtaggggattat
gatcaaagtatttatgcttttaatggagcggatattaatatcataggtgggtttaaagat
cgttttaaagatgcaaaaattttttctttaaataaaaactaccgttcatcaagaagtatt
ttagctttggctaataaagtgattttaaataacgaaagattatatccaaaagaacttatt
gttacaagaaatgatgagtttaaagccccatctttgcttacttttgaagaattatttgat
cagtatcaaaatatagccaaaatgatacttacaagcggagtaagtttggaagaaattgcc
gtgatttttcgcaacaactcaagtgctgatggggttgaagtagctttaagggagcagggc
attgcaagtgtgagaaagggaagtggaagtttttttgaaagtttggaagttaaagctttt
agctccatgcttgcgcttgtggtaaatcctaaggatatcatggcttttattcatttggtt
caatataccaaaggtgtgggtggagttttagcaaaagaaatttttgacgcacttttaaaa
ttagggcatggaaatttaataaaaggttttttagatcctgataaaaatgtaaatttgcaa
aatcatcaaaaaagaaattatcaacttgggctttttgcagatttagaagaattagctagc
gaaactcgttttaaatttgagagtgaatttgacgcacatcctattttaagactttcaaaa
atcaatgatttgtgcgctagaaatttggaaaaaatctatctttttttaaaaaaagctatg
gaaataaaacattctttgactttagtcaatttaatttgcgaaaattctttttatagagaa
atttgcgaagaacttgcaactaaaagagcgacgaacaaagcagggcaggtggatttatta
agaaagagtgaaaatttagaaaaaatagaaacaaaatttaatgtcttaaaagagcttaca
aaaaattatagcgatatttataagtattataattttttaactttaggtgcaagtgaaatg
agtagtggcaaaggagttaatttgcttagcgtacatgcaagtaagggcttggaatttgat
cttgtttttgtgattgatcttgcgcaaggtcgctttcctaatcaaaagcttatgggaatg
ggtggaagcttagaagaagaaagaaggcttttttatgttgcagtaactagggcaaaaaat
atactttatttaagctatgctaaatatgataaaaataaaaaaacttctttcgctccttct
cgttttcttatagaagcagggctttgcaagggagagttaactatagattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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