KEGG T01357: Calkro

Caldicellulosiruptor kronotskyensis: Calkro_0454

Entry

Calkro_0454       CDS       T01357

Name

(GenBank) DNA topoisomerase I

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

ckn Caldicellulosiruptor kronotskyensis

Brite

KEGG Orthology (KO) [BR:ckn00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ckn03032]
    Calkro_0454
   03400 DNA repair and recombination proteins [BR:ckn03400]
    Calkro_0454
Enzymes [BR:ckn01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     Calkro_0454
DNA replication proteins [BR:ckn03032]
Prokaryotic type
  DNA Topoisomerases
   Calkro_0454
DNA repair and recombination proteins [BR:ckn03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Calkro_0454

SSDB

Motif

Pfam:

Topoisom_bac zf-C4_Topoisom Toprim Zn_ribbon_recom HypA RNA_POL_M_15KD Toprim_4 HVO_2753_ZBP Auto_anti-p27

Other DBs

NCBI-ProteinID:

ADQ45354

UniProt:

E4SE67

Position

577320..579401

AA seq 693 aa
MKKLVIVESPAKAKTIAKYLGKEFKVEASMGHVRDLPKSDLGVDIENGFVPKYINIRGKA
DVINRLKKSAQEAEKVYLATDPDREGEAISWHLATILGLDTNDNVRITFNEITKKAVQES
LKNARPIDQNLVNAQQARRVLDRLVGYKLSPFLWEKVKGGLSAGRVQSVATRLVVEREEE
IENFKPEEYWTLEAVFKKDVQEFKAKFYGDKKGKIELKNQDQVQKIEEKIKNKEFKVVKI
KVSEKKKSPPPPFITSTLQQEASRKLRFTPAKTMAVAQMLYEGVEIKGEGSVGLITYMRT
DSTRVSEEAQQAARSLIVQKFGKEYIPEKPRVYKTKKDAQDAHEAIRPTYLDMDPESIKD
SLTLDQYKLYKLIYDRFLASQMESSIYEVLSAELEVEGYIFRLTGSKLKFAGFMEVYVEG
KDTEDEEEENQLPEIREGETLKPIKLESKQHFTQPPSRYTEATLIKALEEKGIGRPSTYA
PTIQTILERGYVAKEDRFLKPTELGRIVTNILKEYFKDIIDIEFTAELESNLDKIEEGKL
EWTEVVKKYYQPLEKELEIARATLLKVKVEDEETDIVCENCGRKMVIKKGRYGKFLACPG
YPECKNTKPYYDYLDVLCPKCGKRIIEKKSKKGKRYYTCEGYPDCDLILWEKPVKNCPKC
GSLMFEKGKKGNKKLVCSNENCAYQEKTGEKGE

NT seq 2082 nt +upstreamnt +downstreamnt
ttgaaaaaacttgtcattgtagagtcacctgcaaaggcaaaaacaattgcaaagtatctt
ggtaaagagtttaaagtagaagcttcaatggggcatgtaagagaccttcccaagagtgat
ttgggcgttgatatagaaaatggttttgtccctaagtatataaacatcagaggtaaggca
gatgtaataaacaggctaaaaaaatctgcacaagaagcagagaaggtttaccttgcaaca
gaccccgacagggaaggcgaggcaatctcatggcatttagcaactattttagggcttgat
acaaacgataatgtgagaattacattcaatgagataacaaaaaaggctgtacaggaatct
ttgaaaaatgcaaggccaattgaccagaacttagttaatgcccagcaagccagaagagtt
ttagacagacttgtcggctacaagctaagtccatttttgtgggaaaaggtcaagggtgga
ctttctgcaggaagggtgcagtctgttgcaacaaggcttgtggttgaaagagaagaggag
atagaaaattttaagcctgaagagtactggaccttagaagctgtatttaaaaaagatgtc
caagagtttaaggcaaagttctatggagataagaaagggaagatagagctaaaaaaccaa
gatcaggttcaaaaaattgaagaaaagataaaaaataaagaattcaaggttgtaaagata
aaggtgtcagagaagaagaaaagtccgcccccaccttttataacaagcacacttcagcag
gaggcatcaagaaaactgagatttactcctgcaaagacaatggcagttgcgcagatgctg
tatgaaggtgttgagataaaaggtgagggaagtgttggacttataacatatatgagaaca
gattcaacaagggtttctgaagaggcacagcaggcagcaagaagtcttatcgtacagaag
tttggcaaagaatatattcctgaaaagccgagggtttacaaaacaaaaaaagatgcgcag
gacgctcatgaggctataagacctacttatttggatatggaccctgagagtataaaagat
tctctgactcttgatcagtacaagctgtacaaactcatttatgacagatttttagcgtcg
cagatggaaagtagcatatatgaagttctttcagccgagcttgaagttgaaggttatatt
tttagactaacaggttcaaagctcaagtttgcagggtttatggaagtatatgttgaaggt
aaggatacagaagatgaagaggaggaaaatcagcttccagaaattagagaaggagagact
ttaaagcccataaaacttgagagcaaacagcattttactcaaccgccttctcgctatact
gaagcaaccttaataaaggctttagaagaaaaggggataggaagacccagcacatacgct
ccaacaatccagacaattctggagagaggatatgttgccaaagaagataggtttttaaaa
ccaaccgaattgggcagaattgtaacaaatatacttaaagaatatttcaaagacataata
gacattgaatttactgcagagcttgagagcaaccttgacaaaattgaggaaggaaaactt
gagtggacagaggtggtaaaaaaatactaccagccacttgaaaaagaacttgagatagca
cgagctactttgctaaaggttaaggttgaggatgaggagacagacattgtatgcgaaaac
tgtggaagaaaaatggtgataaaaaaaggtagatacggaaagttcttggcatgtccagga
tatcctgaatgcaaaaacacaaaaccttattacgattaccttgatgtgttgtgtccaaag
tgcggcaagaggataatagaaaagaagtccaaaaagggcaagagatattacacgtgcgag
gggtatcctgactgtgacctaattttgtgggaaaaaccagtcaaaaactgtccgaagtgt
ggcagtctcatgtttgaaaagggcaagaaagggaataaaaagcttgtatgttcaaatgaa
aactgtgcttaccaagaaaaaacgggggaaaaaggtgagtaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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