KEGG   Corynebacterium kutscheri: UL82_03980
Entry
UL82_03980        CDS       T03866                                 
Symbol
ligA
Name
(GenBank) DNA ligase, NAD-dependent
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
cku  Corynebacterium kutscheri
Pathway
cku03030  DNA replication
cku03410  Base excision repair
cku03420  Nucleotide excision repair
cku03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cku00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    UL82_03980 (ligA)
   03410 Base excision repair
    UL82_03980 (ligA)
   03420 Nucleotide excision repair
    UL82_03980 (ligA)
   03430 Mismatch repair
    UL82_03980 (ligA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cku03032]
    UL82_03980 (ligA)
   03400 DNA repair and recombination proteins [BR:cku03400]
    UL82_03980 (ligA)
Enzymes [BR:cku01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     UL82_03980 (ligA)
DNA replication proteins [BR:cku03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     UL82_03980 (ligA)
DNA repair and recombination proteins [BR:cku03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     UL82_03980 (ligA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     UL82_03980 (ligA)
   MMR (mismatch excision repair)
    DNA ligase
     UL82_03980 (ligA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      UL82_03980 (ligA)
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 PTCB-BRCT MauJ HHH BRCT_2
Other DBs
NCBI-ProteinID: AKE41001
UniProt: A0A0F6TDA4
Position
845296..847392
AA seq 698 aa
MIRIARVNHAKTITTEIRRTWDDLANQIRTHRDAYYNATPTITDQAFDELFQELQQLEAE
YPGLATPDSPTATVGAPVAEESGFAKVAHLERMLSLDNVFDEAELGEWLARTPTNGYLTE
LKIDGLSLDLVYRNGRLERAATRGDGRIGEDVTDNARVINGIPHQLVDSTQYPVPSLLEV
RGEVFITMADFIELNAQRQREHENSKSKAKFKPFANPRNAAAGSLRQKDQEAVKKRRLTM
ICHGIGATDGTTFSSQYEAYQALSAWGLPVSPHTKKVSSVTEVIEQVRYWDAHRHDVAHE
IDGLVIKVDELAEQRELGATSRAPRWAIAYKYPPEEVMTTLLDIQVDVGRTGRVTPFAVM
KPVFVAGSTVEKATLHNQTEVKRKGVLIGDTVIIRKAGEVIPEVLGPVVEDRDGSEREFV
FPSQCPSCGYTLAPQKEGDVDWRCPNTQSCPAQLATRLEYIAGRGAFDIAGLGEKAARDL
IHSQVLIDESGLFNLTSEDLLKTAFYRNDDGKLGKVGQNLLKSLETAKNVELWRVIVALS
IRHIGPTAARAIATRYRSLDVAMAASVEDLAETEGVGMIVAQSFKEWFEVPWHQAIVDAW
ANAGVTMADDSSQAPAPVLAGLTIVVTGSLANFTRDSAKEAIVTRGGKASGSVSKKTDFV
VVGENAGSKETKARELGLTILNEAEFEQLLIDGHVREE
NT seq 2097 nt   +upstreamnt  +downstreamnt
atgattagaatagccagggtgaaccacgctaaaaccattactactgagattcgtcgcacc
tgggatgacctggctaatcagattcgtacacacagggacgcttattataacgccacccca
acgattaccgatcaagcctttgatgaactttttcaagaattacaacaacttgaagcagaa
tatccaggtcttgccaccccagatagtcctaccgcaaccgtgggcgcaccagtagcagaa
gaatctgggttcgccaaagtggcgcaccttgaacgcatgcttagtctggataatgttttt
gatgaagcagaattgggcgagtggttggctcgcacaccgacaaatgggtatttaaccgag
ctgaaaattgatggtttgtcgctggatttggtgtatcgaaatgggcgtttagagcgtgcg
gctactcgtggtgatggtcggataggcgaagacgtcaccgataatgcacgcgttattaat
ggtattccacaccagttggttgatagtacccaatacccagtaccgagcctattagaggtg
cgcggcgaagtttttattaccatggctgattttattgagttgaatgcgcagcgtcagcgc
gagcatgaaaatagcaagtccaaggctaaatttaagccttttgctaatccacgtaacgct
gctgctggttctttaaggcaaaaagatcaagaagcagtgaaaaaacgtcggcttactatg
atctgccatggcattggtgctaccgacggtacaacttttagcagtcaatatgaggcatat
caggctctttctgcctggggtttaccagtaagcccgcatactaaaaaagtttcttcggta
accgaggttattgagcaagtgcggtattgggatgctcaccgtcatgatgttgctcatgag
attgatggcctagttatcaaagttgatgaattagctgaacagcgtgaactcggtgctacc
tcacgtgctcctaggtgggcaattgcctataagtatccacccgaagaagtaatgactaca
ttgctagacattcaggtagacgttggtcgcaccggtagagtaactccttttgcagtgatg
aaaccggtatttgtggctggatcgactgtggaaaaagctaccttacataaccaaactgag
gtgaaacgtaaaggagtattaatcggcgacaccgtgattatccgcaaagcaggagaggta
attccagaggttcttggacctgttgtcgaagaccgtgacggtagtgagcgcgagtttgta
ttcccaagtcaatgtccctcctgcgggtataccctggctccacaaaaagaaggcgatgta
gattggcggtgccctaatacccagagttgcccagcacagcttgctactcggttggaatat
attgccgggcgaggagcatttgacatcgccggccttggtgaaaaagccgctcgcgactta
attcactcgcaggtacttattgatgagtctgggctatttaatctcactagtgaggatcta
ttaaaaactgctttttatcgaaatgacgatggaaaattaggcaaggtgggacagaattta
ttaaagagcctagaaacagcgaaaaatgtggaattatggcgggtaattgttgcgttatct
attcgccatattggtcctaccgctgcgcgtgcaatcgctactcgctatcgcagtttagat
gtggcgatggcagctagtgttgaagaccttgctgaaaccgaaggcgtaggcatgattgtc
gcacagagttttaaagagtggtttgaagtgccttggcatcaagcgattgtagacgcgtgg
gctaatgcaggggtgactatggctgatgatagtagtcaggcaccagcgccggtgcttgct
ggtttaactattgtagttactggttctttagctaatttcacccgtgattccgctaaggaa
gccattgttactcgaggcggtaaagctagtggttcagtatctaagaaaacagattttgtg
gtggttggcgaaaatgctggctccaaggaaacaaaagctcgggaattgggcctgactatt
ttgaatgaagctgaatttgaacaattgcttatcgacggacacgtgcgcgaagagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (30)   

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