KEGG   Cellulophaga lytica HI1: IX49_06945
Entry
IX49_06945        CDS       T03279                                 
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase
  KO
K00239  succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
Organism
clh  Cellulophaga lytica HI1
Pathway
clh00020  Citrate cycle (TCA cycle)
clh00190  Oxidative phosphorylation
clh00650  Butanoate metabolism
clh01100  Metabolic pathways
clh01110  Biosynthesis of secondary metabolites
clh01120  Microbial metabolism in diverse environments
clh01200  Carbon metabolism
Module
clh_M00009  Citrate cycle (TCA cycle, Krebs cycle)
clh_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:clh00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    IX49_06945 (sdhA)
   00650 Butanoate metabolism
    IX49_06945 (sdhA)
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    IX49_06945 (sdhA)
Enzymes [BR:clh01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     IX49_06945 (sdhA)
SSDB
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C DAO Pyr_redox_2 GIDA HI0933_like NAD_binding_8 AlaDh_PNT_C Pyr_redox
Other DBs
NCBI-ProteinID: AIM60269
Position
1564779..1566794
AA seq 671 aa
MSVLDSKVPKGPLKTKWTDYKNHIDLVNPANKRNIDVIVVGTGLAGGSAAATLAELGYNV
KTFCYQDSPRRAHSIAAQGGINAAKNYQGDGDSTYRLFYDTVKGGDYRSREANVYRLAEV
SANIIDQCVAQGVPFARDYGGLLDNRSFGGVLVSRTFYAKGQTGQQLLLGAYSAMNRQIA
RGKITPFNRHEMLDVVKVDGKARGIIARNLVTGEIERHSAHAVVIASGGYGNVYFLSTNA
MGSNATAAWKIHKKGAFFANPCYTQIHPTCIPRSGDYQSKLTLMSESLRNDGRIWVPKHI
EDVKAIREGKKKPTDLSEDERDYYLERRYPAFGNLVPRDVASRAAKERCDAGYGVNATGE
AVYLDFASAIERYGKEQAKIHNITNASKEKIYDLGKAIVEAKYGNLFQMYEKIVDQDPYK
TPMMIYPAVHYTMGGVWVDYNLMTTVDGLYCIGEANFSDHGANRLGASALMQGLADGYFV
LPYTIGDYLSHEIRTGKIPTDTPEFDAAEKEVKDKIDFFVNNNGKHSVDYYHKKLGNIMW
EKCGMSRNAEGLKEAMVDIKALREDFYKNVSVPGNANELNSELEKAGRVADFLELGELFA
KDALVREESCGGHFREESVELDGEQKGEAKRNDEEFAFVSAWEYKGEPGDAVLHKEELEF
NEIELKQRSYK
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgtctgtattagattctaaagtacctaaaggccctcttaaaactaagtggaccgattat
aaaaaccatatagatttagttaacccagctaacaagcgtaacatagatgttattgttgtt
ggtacaggtttagctggtggttctgctgctgctactttagcagagttgggctacaatgta
aaaacattttgctaccaagattctccgcgtagagcacactctattgcggcacaaggtggt
ataaatgcagcaaaaaattaccaaggagatggagactctacctaccgtttgttttatgac
acggttaaaggtggtgattatcgttctcgtgaagcaaacgtttatcgtttggctgaggta
tcagcaaatataatagaccagtgtgttgctcaaggggttccttttgcacgtgattatggc
ggattgttagacaaccgttcttttggtggtgtattagtttctagaactttttatgctaaa
ggacaaacaggtcagcaattgttgttaggcgcatattctgcaatgaacagacaaattgcg
cgtggtaaaattactccattcaatcgtcatgaaatgctagacgttgttaaggtagatggt
aaagctcgtggtattattgctcgtaacttagttactggtgaaatagaacgtcattctgct
catgcagtagtaattgcctctggtggttatggtaatgtatatttcttatctaccaatgca
atgggttctaacgcaacagctgcttggaaaatacacaaaaagggagcgtttttcgcaaac
ccttgctacacgcaaattcacccaacttgtatacctcgttcaggagactatcaatctaaa
ttaacattgatgtctgagtctttacgtaatgatggtcgtatttgggttccaaagcatatt
gaagacgttaaagcaattcgtgaaggcaagaaaaagccaaccgatttgtctgaagatgaa
agagattattacttagaaagaagatatcctgcatttggtaacttagtaccgcgtgatgtt
gcgtctagagcagcaaaagaacgttgtgatgctggttacggtgttaacgcaactggtgag
gcagtttatttagattttgcttctgcaattgagcgttacggtaaagaacaggctaaaatt
cacaatattacaaatgcatctaaagaaaagatatacgatttaggtaaggctattgttgag
gctaaatacggtaacttgttccagatgtatgagaaaattgtagatcaagatccatacaaa
acaccaatgatgatttacccagcggtacattacacaatgggtggtgtttgggtagattat
aacttaatgactactgtagacggtttatactgtattggtgaggctaacttctctgatcac
ggtgcaaacagactaggagcttctgctttaatgcaaggtttagcagatggttattttgtg
ttgccttacacaattggagattatttatcgcatgagattagaacgggtaaaatacctact
gacactccagagtttgatgctgctgaaaaagaggttaaagataaaattgatttctttgta
aacaataacggtaaacactctgtagattattaccataagaaattaggtaatattatgtgg
gagaaatgtggtatgtctcgtaatgctgaagggttaaaagaggcaatggtagatattaaa
gcactacgtgaagatttctataaaaatgtaagtgtacctggtaatgctaatgagttaaat
agcgaattagagaaagcaggccgtgtggcagatttcttagaattaggtgagttatttgct
aaagatgcacttgttagagaggaatcttgtggtgggcactttagagaagaatctgtagaa
ttagacggcgaacaaaaaggtgaagctaagcgtaacgatgaggagtttgcttttgtttct
gcttgggaatataaaggagaacctggtgatgctgtattgcataaagaggagctagagttc
aatgaaatagaattaaaacaacgttcatacaaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (13)   
   KEGG PATHWAY (7)   
   KEGG MODULE (6)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (34)   

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