KEGG   Campylobacter lari subsp. concheus LMG 11760: CONCH_0796
Entry
CONCH_0796        CDS       T03557                                 
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
cll  Campylobacter lari subsp. concheus LMG 11760
Pathway
cll03420  Nucleotide excision repair
cll03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cll00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CONCH_0796 (rep)
   03430 Mismatch repair
    CONCH_0796 (rep)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cll03400]
    CONCH_0796 (rep)
Enzymes [BR:cll01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CONCH_0796 (rep)
DNA repair and recombination proteins [BR:cll03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CONCH_0796 (rep)
   MMR (mismatch excision repair)
    Other MMR factors
     CONCH_0796 (rep)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_11 AAA_30 ResIII DEAD Churchill
Other DBs
NCBI-ProteinID: AJC89208
Position
753819..755840
AA seq 673 aa
MPLSRLNEEQYKAASAPFGHNLIIASAGTGKTSTIVARIAFLLQNGIKPEKIMLLTFTNK
ASKEMIERLGRYFDKSITLKITAGTFHSTAYSLLKELNHDIILKPASELKILLRSIFEKR
TFHHLSDTKPYMPSYLYDVYSLFQNTNANLDEFYNWFCQNYDEQAIYAEIYEDILKEYEE
EKARFNYVDFNDLLIKLKHVLASHHFEFDEILVDEYQDTNTLQGSLIDAFKSKSLFCVGD
YDQSIYAFNGADISIIGSFKDRFIDANIFTLNKNYRSSKNILALANKVILNNERLYPKEL
IVTREGDFKAPSLLTFNELFDQYSTIAKIILQSGVNLDEIAVIFRNNSSADGVEVALREL
GIASKRKGGGSFFESLEVKNFCSMLAIVLNPKDIMAFIHLLEYTKGVGGVLAKDIFDALL
KLGHSSLIKGFLNPDSSVSLKKYKKQSYQLGLFDDIEELASPSRFNLESEFNTHPILSLP
KINELCAKNLEKIYLFIKKASECKVSTQLVNLILENDYFKEICDILATKRATNKNSNVDL
NKKSEILEKINAKMFVLKELAKNYSDNYKYYNFLTLGASEMSSGSGVNLLSIHASKGLEF
ELVFVIDLAQGRFPNQKLMSMGGSLEEERRLFYVAVTRAKDTLYLSYAKYDKIKKSNYQP
SCFLIEAGMCKEE
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgcccttatcgcgtttaaatgaagaacaatacaaagccgctagtgctccttttggacat
aatctaatcatagcaagtgcaggtacaggtaaaacttcaaccatagttgcaagaatagct
tttttacttcaaaatggcataaagcctgaaaaaattatgcttttaacttttacaaacaaa
gctagtaaagaaatgatagaaagacttggtaggtattttgataaaagtattactttaaaa
atcacagcaggaacctttcatagtactgcttattctctacttaaagagttaaatcatgat
attattttaaaacctgctagtgagcttaaaattcttttacgttctatttttgaaaaacgt
acttttcatcatctaagtgatactaaaccttatatgccaagttatttgtatgatgtatat
tctttatttcaaaatactaatgcaaatttagatgaattttataattggttttgtcaaaat
tatgatgaacaagctatttatgctgaaatttatgaggatattttaaaagaatacgaagaa
gaaaaagcacgttttaactatgtagattttaatgatttattgattaaattaaaacatgtt
ttagcttcacatcattttgaatttgatgagattttagtagatgaataccaagatactaat
actttacaaggttcattaattgatgcttttaaaagtaaaagtttattttgtgtgggtgat
tatgatcagagtatctatgcttttaatggggctgatatttctattataggaagttttaaa
gatagatttatcgatgcaaatatttttactttaaataaaaactatcgttctagtaaaaat
atacttgcgctggctaataaagtaattttaaacaatgaaagattataccctaaagaattg
attgtaaccagagaaggagattttaaggcaccaagtttgctaactttcaatgaattattt
gatcaatactccaccatagcaaaaataatcttacaaagtggagttaatcttgatgaaatt
gctgttatttttagaaacaattctagcgcagatggagtagaagttgccttaagagaactt
ggtatagcaagcaaaagaaaaggtggaggaagcttttttgaaagcttggaagttaaaaac
ttttgctctatgcttgcaatcgtgcttaatccaaaagatatcatggcttttatacatttg
cttgaatacaccaaaggagtcggtggggttttagcaaaagatatttttgatgctttatta
aaactggggcattctagcttgattaaaggttttttaaatcctgatagtagtgttagttta
aaaaaatacaaaaaacaaagttaccaactaggactttttgatgatattgaggagctagcc
tcgccttcaaggtttaatttagaaagtgaatttaacacccaccctattttaagccttcct
aaaatcaacgagctttgtgcgaaaaatcttgaaaaaatttatctttttattaaaaaagca
agcgagtgtaaagtttcaactcagcttgtaaatttaatcttagaaaatgattattttaaa
gaaatttgtgatattttagcaaccaaaagagcgactaataaaaactccaatgttgattta
aataaaaaaagtgaaattttagaaaaaatcaatgcaaaaatgtttgtactaaaagaactt
gctaaaaattatagtgataattataaatattataattttcttactcttggtgctagtgaa
atgagtagtggcagtggggttaatcttttaagtatacatgctagtaaggggcttgagttt
gagcttgtatttgtaattgatcttgcacaaggaagatttcctaaccaaaaactcatgagt
atgggtggaagtttagaagaagaaagaaggcttttttatgtagcagtaactagagctaag
gatactttatacttaagctatgcaaaatatgacaagataaaaaaaagcaattatcaacct
tcgtgttttctaatcgaagcaggtatgtgtaaagaggaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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