KEGG   Clavispora lusitaniae CBS 6936: A9F13_05g02431
Entry
A9F13_05g02431    CDS       T05147                                 
Name
(GenBank) putative replication factor C subunit
  KO
K10755  replication factor C subunit 2/4
Organism
clus  Clavispora lusitaniae CBS 6936
Pathway
clus03030  DNA replication
clus03410  Base excision repair
clus03420  Nucleotide excision repair
clus03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:clus00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    A9F13_05g02431
   03410 Base excision repair
    A9F13_05g02431
   03420 Nucleotide excision repair
    A9F13_05g02431
   03430 Mismatch repair
    A9F13_05g02431
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:clus03032]
    A9F13_05g02431
   03036 Chromosome and associated proteins [BR:clus03036]
    A9F13_05g02431
   03400 DNA repair and recombination proteins [BR:clus03400]
    A9F13_05g02431
DNA replication proteins [BR:clus03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    A9F13_05g02431
  DNA Replication Termination Factors
   ELG1-RFC complex
    A9F13_05g02431
Chromosome and associated proteins [BR:clus03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    A9F13_05g02431
DNA repair and recombination proteins [BR:clus03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     A9F13_05g02431
  Check point factors
   HRAD17(Rad24)-RFC complex
    A9F13_05g02431
SSDB
Motif
Pfam: AAA Rep_fac_C DNA_pol3_delta2 Rad17 AAA_22 AAA_11 RuvB_N AAA_16 Mg_chelatase AAA_24 SLFN-g3_helicase AAA_14 AAA_5 DUF815 AAA_assoc_2 ResIII bpMoxR AAA_28 nSTAND3 AAA_19 AAA_7 AAA_2 DNA_pol3_gamma3 AAA_30 AAA_3 RNA_helicase AAA_18 AAA_6
Other DBs
NCBI-ProteinID: OVF09434
UniProt: A0AA91Q1T0
AA seq 339 aa
MSSYDQERLDHTPWVEKYRPKKLDDVASQDHAVRVLQKTLQSANLPHMLFYGPPGTGKTS
TVLALAKQLYGPRLYRSRVLELNASDERGISIVRQKIKNFARLTVSNPSPEDLREYPCPP
YKIIILDEADSMTNDAQSALRRTMENYSGVTRFCLICNYITRIIDPLASRCSKFRFRSLD
GENALSRLRYVVEQEHIPLASDSVLNDILAVSGGDLRKAITYLQSATRSGDAGGVSSAKI
KEISGVVDDASMETLVGAIRAKNPKEIAHVVKDTVLEGWSAQQTAAQLHDVFLLDDALSS
QEKNDIARLLFETDKRLNSGTDEHIQLLNLSLQIAGALA
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgctgtcgtacgaccaggaaagactcgaccacacgccgtgggtcgaaaagtaccgcccc
aagaaactcgacgacgtggcgtcgcaggaccacgccgttcgcgtgctccagaaaaccctc
cagctggccaacttgccacacatgctcttctacggcccgcctggaacaggcaaaacatcc
acggtgttggcgctcgccaaacagctctacggcccacgcttgtatcgtctgcgggtgctt
gagctcaacgcatcggacgaacgaggcattctgattgtgcgccagaagatcaaaaacttt
gcccggctcacggtgtcgaacccgtcgcccgaggacttgcgcgagtacccgtgtccgccg
tacaagatcatcatcttggacgaggccgactccatgaccaacgatgcgcaatcggcgttg
cggcgcaccatggaaaactactcgggcgtgacgcgtttctgcttgatttgcaactacatc
acgcgcatcatcgacccgttggcgctgcggtgctccaagttccgcttccgcctgttggac
ggcgaaaacgccttgctgcgcttgcgctatgtcgtggagcaggaacacatcccgcttgcg
ctggatctggtgctcaatgacattttggccgtctcgggcggcgacttgcggaaagccatc
acgtatttgcagtcggccacgcgcctgggcgacgctggcggcgtttcgctggccaaaatc
aaagagatttcgggcgtcgtggatgatgcgctgatggagactttggtcggggccattcgg
gcgaaaaacccaaaagagattgctcatgtggtcaaggacaccgtcctcgagggctggagc
gcccagcagacggcggcacagctccacgatgtgtttcttcttgacgacgccttgtcctcg
caggaaaagaacgacattgcccgtcttttgtttgaaacagacaagcgcttgaacagtgga
accgacgagcacatccaattgttgaacttgtctcttcagatcgcaggtgcattggcatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (28)   
   Pfam (28)   
All databases (41)   

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