KEGG   Columba livia (rock pigeon): 102093054
Entry
102093054         CDS       T02912                                 
Name
(RefSeq) keratin, type II cytoskeletal cochleal-like
  KO
K07605  type II keratin, basic
Organism
clv  Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:clv00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:clv04812]
    102093054
   04147 Exosome [BR:clv04147]
    102093054
Cytoskeleton proteins [BR:clv04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Types I and II: Acidic and basic keratins
     102093054
Exosome [BR:clv04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   102093054
  Exosomal proteins of other body fluids (saliva and urine)
   102093054
  Exosomal proteins of colorectal cancer cells
   102093054
  Exosomal proteins of bladder cancer cells
   102093054
SSDB
Motif
Pfam: Filament Keratin_2_head TPR_MLP1_2 ATG16 CENP-F_leu_zip LRS4 DUF4600 ATG14 DUF4407
Other DBs
NCBI-GeneID: 102093054
NCBI-ProteinID: XP_021137913
Position
Unknown
AA seq 505 aa
MLSSSHPSHHVHFVEVSRSLALFSMQIKGRRCCSVVRGAAPEPAXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXSSVALPRNHRSSSAASCHRGAAVGNRGPGCSSSGSLDGCRPAGAAG
RRPPPRRGYGVGAAGAGGGSRSAGFGCRAGGASRPRTITPVTINEQLLQPLCLQLDANVH
AVKHQETEQIKTLNNKFASFIDKVRLLEQQNKVLETKWSFLQAQKRPGRSAVPALQAFIA
HLKEQLEALGCDRARLETDLKAAQQQLENNRKMYKDERSRRPRTDSQFVALKKDAGCFFL
NKAELEAKLESLKEEVGFLRTFYEEETRQLRANVSEPSVVLQMDNSRDLDLGGVAADVRA
QYEDIARRSRAEAQAWHESKFEELRVTAGRNAASLQETKTKIAELTRSIQTLSRGLCGAK
DQRRRLEDALAAAEQRGGAAVQDAKRKLSELQTALQRSRAELARQLRDCQQLSSARLGLD
IEIVTYKKLLEGEESRWVTAQGCTW
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgctaagcagctcgcatccttcgcatcacgttcattttgtggaagtttcacgcagcctc
gccctgttttccatgcaaataaaaggaagaaggtgctgcagtgtggtcagaggagctgca
cccgagcccgctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttcctctgtagctcttccc
cggaaccaccgcagttccagcgctgcctcgtgtcaccgcggtgctgccgtggggaaccgc
ggtccgggctgctccagcagcgggagcctggacggctgcaggcccgcgggggctgctgga
cggcgccctcctccgaggcgcggatacggcgtcggcgcagccggcgcggggggcggcagc
aggagcgctggctttggctgcagggctgggggggcatccaggccacgcaccatcacgccc
gtcaccatcaacgagcagctgctccagccgctctgcctgcaactcgatgccaacgtacac
gcggtgaagcaccaagagacggagcagatcaagaccctcaacaacaagtttgcttccttc
atcgacaaggttcggctcctggagcagcagaacaaggtcctggagaccaagtggagcttc
ctgcaggctcagaagcgccccgggcgcagcgccgtgcccgcgctccaggccttcatcgcg
cacctgaaggagcagctggaagcgctgggctgcgacagagcccggttggagacagacctg
aaagcagcacagcagcagctggaaaacaacaggaaaatgtacaaggacgaacgcagccgg
cggccgcgcaccgacagccagtttgttgccctgaagaaggacgcgggctgttttttctta
aacaaagcggagctggaggccaagctggaaagcctgaaagaagaggttgggttcctgcga
acgttctatgaggaggaaacccggcagctgcgggcgaacgtctcggagccttcggtggtg
ctgcagatggacaacagtcgagatctggacctgggcggcgttgctgcggacgtcagggct
cagtacgaggacattgcccgcaggagccgggcggaagcgcaggcctggcacgaaagcaag
tttgaggagctgcgagtgaccgcgggcagaaacgccgccagcctgcaggagacaaaaacc
aagatagctgagctgacacggagcatccagacactgagcagaggcctctgtggagccaag
gaccagcgccgcaggctggaggacgccctggccgccgccgagcagcgcgggggagcggcc
gtccaggacgcgaagcgcaagctctccgagctgcagacggcgctgcagcgcagcagggca
gagctggcccggcagctgcgcgactgccagcagctcagcagcgccaggctgggcctggac
atcgagatcgtcacctacaagaagctgctggagggcgaggagagcaggtgggtgacagcc
cagggctgcacgtggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (41)   

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