KEGG   Columba livia (rock pigeon): 102093437
Entry
102093437         CDS       T02912                                 
Symbol
POLA1
Name
(RefSeq) DNA polymerase alpha catalytic subunit isoform X1
  KO
K02320  DNA polymerase alpha subunit A [EC:2.7.7.7]
Organism
clv  Columba livia (rock pigeon)
Pathway
clv03030  DNA replication
Brite
KEGG Orthology (KO) [BR:clv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    102093437 (POLA1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:clv03032]
    102093437 (POLA1)
Enzymes [BR:clv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     102093437 (POLA1)
DNA replication proteins [BR:clv03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase alpha / primase complex
    102093437 (POLA1)
SSDB
Motif
Pfam: DNA_pol_B DNA_pol_B_exo1 zf-DNA_Pol DNA_pol_alpha_N DNA_pol_B_2 DUF1744 MTR4_beta-barrel
Other DBs
NCBI-GeneID: 102093437
NCBI-ProteinID: XP_005503767
UniProt: A0A2I0MLS3
Position
Unknown
AA seq 1490 aa
MYESGNFAASRSRRERKSKRGQQEALERLKKAKAGEKIKYEVEEFTGVYDEIDEEEYSKR
VRERQDDDWIVDDDGIGYVEDGREIFDEDLDDDALGSNKKGKGGKISTVDKKNVKKSVVS
KPNTIKSMFIASAGKKSTDKTVDLSKDDLLGDILQDLNAETVPISPPPIITLKRKRSAGV
PLNPFSVQSQNPKAITPISKKAPAHLRKEAVPAASFHPKHPNYTAKSAIDSENEDIKYVQ
KATENGGTVKTIEEKAIEDDDQGMMDFDEEDFDEPMEAKHVETVPETAESLKRDKEIEKK
ETEQLESEKKETSLLSCSLPDISCWDRIDEDEADLVVAEVQLDPDLLPLVNGENDDQVLR
FYWLDAYEDQYSQPGVVFLFGKVWIESANTYVSCCVTVKNIERTVYLLPRETEFDLSTGK
ETETPVTIMSVFKEFNDCISPKYKIMKFKSKKVEKYYAFEIPDIPAKSEYLEVKYSAECP
RLPQDLKGQTFSHIFGTNTSSLELLLLSRKIKGPCWLEIKNPQPSSQSVSWCKVEAVAVK
PGLVNVVKDLCPPPPIVVMSLSIKTTQNPKTHQNEIVAVAALIHQKFPLDKAPPQPPFQT
HFCAVSKPNDCIFPYDFKEVIKKKNAKIEITATERTLLGFFLAKIHKIDPDVVVGHNIYG
FDLEVLLQRINVCKVPHWSKIGRLRRSNMPKLGGRGGFAERSAACGRMICDVEISAKELI
RCKSYHLSELVRQILKIEKITILPEEIRNMYSDSRHLMFMLENTWTDAKFILQIMCELNV
LPLALQITNISGNVMSRTMMGGRSERNEFLLLHAFYEKDYIVPDKQVFKKPLQKLVDEDE
DFEDQNKSKIGKKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRL
SSEAQKRAEVNEEEEIPELPDPSLEMGILPKEIRKLVERRRQVKQLMKQPDLNPDLYLQY
DIRQKALKLTANSMYGCLGFSYSRFYAKPLAALVTHKGREILMHTKEMVQKMNLEVIYGD
TDSIMINTNSTNLDEVFKLGNKIKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALTVEP
TGDGKYVTKQELKGLDIVRRDWCDLAKETGNYIISQILSDQPRDIIVENIQRRLIEIGEN
VINGQIPVNQFEINKALTKDPQDYPDKKSLPHVHVAMWINSQGGRKVKAGDTVSYIICQD
GSDLSASQRAYAPEQLQKQGNLTIDTQYYLSQQIHPVVARICEPIEGIDSVLIATWLGLD
PSQFRVHHHYHKDEENDALLGGPAQLTDEEKYRDCERFKFCCPKCGTENIYDNVFDGSGR
FLEPSLQRCSKTECEESPFNHVVQMNNKLLLDIRRFIRKYYHGWLICEEPTCQNRTRRVP
LHFSRSGPVCQACRKAVLRPEYSDKALYTQLCFYRYIFDLDYAKDKVITEEEKKYFKKQP
LRNEVSEAYKKLKSTVDQYLSMSGYSEVNLGKLFTFSIGKSVVESSNERQ
NT seq 4473 nt   +upstreamnt  +downstreamnt
atgtatgagtctggaaattttgcagcatcacgttctaggcgtgagaggaagtctaaaaga
ggccagcaagaagcactggaacgtctgaaaaaagccaaagctggtgaaaaaataaaatat
gaggttgaggagttcacgggtgtttatgatgaaatagatgaggaagaatactccaagagg
gtcagagaacgtcaggatgatgactggattgttgatgatgatgggataggttatgtagaa
gatggaagggaaatatttgatgaagatctggatgatgatgctcttggttccaataagaaa
ggaaaaggtggcaaaatatctacagttgataaaaagaatgtgaaaaaatctgtggtgtca
aagccaaacacaattaagtctatgtttatagccagtgctgggaagaaaagcacagataaa
actgtggacctgtcaaaggatgatttactaggcgatattctacaagaccttaatgctgaa
actgttccgataagtccaccaccaattataacactgaaaaggaaaagatctgctggagtg
ccactgaatcctttctctgtgcagtcccaaaatcctaaggcaatcacccctatatcaaag
aaagctcctgctcatctcagaaaggaagctgttcctgcagcttcatttcatcctaaacat
ccaaattacacagcaaaatctgccatagactctgaaaatgaggatatcaagtatgtgcaa
aaagctacagaaaatgggggaacagtgaagacaatagaagagaaagctattgaagatgat
gatcagggaatgatggattttgatgaggaggactttgatgaacctatggaggcaaagcat
gtggaaactgtacctgagactgctgaaagcttgaagagagacaaggaaattgaaaagaaa
gagacagagcagctggaatcagagaagaaagagacatctctcttaagttgttctctccca
gatatctcatgttgggacagaattgatgaagatgaagctgatctagtagtggcagaagtt
cagctggaccctgatctccttccacttgtgaatggggaaaatgatgatcaagtcctaaga
ttttattggctggatgcttacgaagatcagtacagtcagccaggtgtggtgtttttgttt
ggcaaagtttggattgaatctgcgaacacctatgttagctgttgtgtgacagtgaaaaat
attgagagaactgtttacctactgccacgtgagacagaattcgacctgtccactggcaaa
gagacagagactccggtaactataatgagtgttttcaaggaatttaatgactgcatttca
ccgaagtataagatcatgaagttcaaatccaagaaagtggaaaaatattatgcatttgag
atcccagatattccagccaaatccgaatacttagaagttaaatattcggctgaatgtcct
cgtcttccacaagatctgaaaggacaaacattttcacacatatttggaactaacacgtct
agcctggaacttctcctgttgagcaggaagatcaaaggaccgtgctggctggaaataaaa
aatccacagccttccagtcagtcagtcagctggtgtaaggtggaggctgtggccgtgaag
cctggcttggtgaatgtggttaaagatctttgtcctcctcctcctatcgtggtcatgtcc
ctcagcattaagactactcagaacccaaagactcaccagaatgagattgtggctgtagca
gctctgattcatcagaaatttcctttggataaggctccacctcagcctccttttcagacg
cacttctgtgctgtttccaaaccgaacgattgcatttttccttatgacttcaaagaagtt
attaaaaagaagaatgctaaaatagaaattacggcaacagagagaacactgctgggattt
ttccttgcgaagattcacaaaattgaccctgatgttgttgtgggtcataatatttatgga
tttgatctggaagtgctgcttcaaagaattaatgtgtgcaaagtccctcactggtccaag
ataggtcggctgaggaggtccaatatgccaaagcttgggggtcgaggagggtttgctgaa
aggagtgctgcatgtggtcgaatgatctgtgatgtagaaatttctgctaaagaattaatt
cgttgcaaaagttaccatttgtctgaactggtccgtcagattttgaaaatagaaaagata
acaattttaccagaggaaattcgaaatatgtacagtgattctcgtcacttaatgtttatg
ctggaaaacacctggacagatgccaagtttattctccaaatcatgtgtgagctgaatgtt
ctgccactggcccttcaaataacaaacatctctgggaatgtcatgtcaaggacaatgatg
ggtggacgatctgaacgtaatgagttcttgctgcttcatgcattttatgaaaaagactac
atagtccctgacaaacaagtttttaaaaaacctctgcagaaactggtggatgaagacgaa
gattttgaagatcagaataaatcaaagatagggaaaaagaaagcagcatatgctggtggc
ttggtcttggatcccaaagttggtttttatgacaagtttattttgcttctcgacttcaac
agcttgtacccatcgattattcaagagtttaacatctgctttaccacagtgcagagactg
tcatcagaagcacagaaaagggcagaggtcaatgaagaggaagaaattccagagcttccg
gacccatctctggaaatgggaattttgcctaaagaaatcaggaagctggtggagagaagg
cgccaagttaagcagttaatgaaacagccagatttaaatcctgacctttatttacagtat
gatatcagacagaaagctttgaaactcactgctaacagcatgtatggctgcctgggattt
tcctacagcagattctatgccaagcctttggctgctttggtgacacataaagggagagag
attttgatgcataccaaggagatggtgcaaaagatgaaccttgaagtaatttatggagac
acggattccattatgataaacactaatagcaccaatttggatgaggtattcaagctgggg
aacaagatcaaaagtgaagtgaacaagctctacaaattgttggaaatcgatattgatgga
gtctttaagtccttgctactgctgaagaagaagaaatatgctgctcttactgtggaacca
acaggagatgggaaatatgtaactaaacaagaactgaaaggactggacatcgtccgaaga
gactggtgtgatcttgcaaaagagactggaaactatataattagtcagattctttctgat
cagccccgagacataatcgtggaaaacattcaaaggcggcttatagaaattggagaaaat
gtgatcaatggccagatcccagtaaatcagtttgaaataaacaaggcattgacaaaagat
ccacaggattatcctgacaaaaaaagtttgccacatgtgcatgttgccatgtggataaac
tctcaaggaggccgaaaggtgaaggcaggagacacagtgtcatacatcatttgtcaggat
ggatcagatctcagtgccagccagcgcgcatatgctccagaacagttgcaaaagcaaggc
aatcttactattgatactcagtactatctgtcacaacagatacatccagtagttgctaga
atatgtgagcccatagagggaattgattctgttcttattgcaacgtggttaggactggat
ccctcccaattcagagtccatcaccattaccataaagatgaggagaacgatgccttgctt
ggtggcccagctcagctcactgatgaggagaaatacagggattgtgaaagattcaagttt
tgctgcccgaaatgtggaacagaaaatatttatgacaatgtctttgatggttcgggacga
tttcttgaacccagcttgcaaagatgcagtaagactgaatgtgaagagtctcctttcaac
cacgtggttcaaatgaacaacaaattactgttggatattagacgcttcatcagaaaatac
tatcatggttggttaatatgtgaggagccaacctgccagaaccgaacccgtcgagttccc
ctgcatttttcccggagcggccccgtgtgccaggcctgcaggaaggctgttctgagacca
gagtattctgataaggccctgtacactcagctgtgcttttaccgatacatttttgatttg
gattatgcaaaggataaagttattactgaagaggaaaaaaagtattttaagaagcagcca
ctcaggaatgaagtctctgaggcctacaaaaaactgaagagcacggtagaccaatacctg
tccatgagtgggtactcagaagtgaacctcggcaaactctttaccttcagtataggaaaa
tccgtggtggagtccagtaatgaaagacagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (15)   
   UniProt (1)   
   RefSeq(pep) (14)   
DNA sequence (14)   
   RefSeq(nuc) (14)   
Protein domain (7)   
   Pfam (7)   
All databases (82)   

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