KEGG   Cellulophaga lytica DSM 7489: Celly_0486
Entry
Celly_0486        CDS       T01434                                 
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
cly  Cellulophaga lytica DSM 7489
Pathway
cly03030  DNA replication
cly03430  Mismatch repair
cly03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cly00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Celly_0486
   03430 Mismatch repair
    Celly_0486
   03440 Homologous recombination
    Celly_0486
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cly03032]
    Celly_0486
   03400 DNA repair and recombination proteins [BR:cly03400]
    Celly_0486
Enzymes [BR:cly01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Celly_0486
DNA replication proteins [BR:cly03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Celly_0486
DNA repair and recombination proteins [BR:cly03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Celly_0486
SSDB
Motif
Pfam: RNase_T ExoX-like_C RNase_H_2 Rv2179c-like
Other DBs
NCBI-ProteinID: ADY28321
UniProt: F0R9Z2
Position
complement(528543..529319)
AA seq 258 aa
MDLKLTRPICFFDLETTGINVAKDRVVEISILKVYPNGNKESKTWLVNPEMHIPDEVVAV
HGISNEKVANEPTFAQLSKEIYAMIKDCDLGGYNSDRFDIPLLAEEMLRAGVDFDMKNTV
SVDVQTIFFKMEKRTLEAAYKFYCNKELTNAHSAAADTNATFEVLKSQLDRYPELENDIK
KLSEFTTRKKFADFAGFIIIDQDGDPAFSFGKHKGKKVDEVLEKEPGYFGWILNADFPLY
TKKVLTQIKLSKLNNKLS
NT seq 777 nt   +upstreamnt  +downstreamnt
atggatttaaaattaacacgcccaatttgtttttttgacttagaaacaacaggtataaac
gtggctaaagatagagtggtagagatttccattttaaaagtataccctaacggaaataaa
gaaagtaaaacttggctagtaaacccagaaatgcatataccagatgaggttgttgcagtg
catggtattagcaatgagaaagttgcaaatgaacctacttttgcacaattatctaaagaa
atttacgcaatgattaaggattgtgacctaggaggttacaattcagataggtttgatatt
ccacttttagctgaggaaatgttacgtgcaggagtagattttgatatgaaaaatacagta
tctgtagatgtgcaaactatcttttttaagatggagaaaagaactttagaggctgcttat
aaattttattgcaataaagagcttacaaatgctcacagtgctgccgcagatacaaatgca
acttttgaggtcttaaaatcacaattagaccgttatccagaattggaaaacgacattaaa
aaactatcagaatttaccactcgtaaaaagtttgcagattttgctggctttattataata
gatcaagatggtgacccagctttttcttttggtaagcataagggtaaaaaggtagatgaa
gttttagaaaaagaaccaggctattttgggtggattttaaatgcagattttccgttgtat
actaaaaaagtacttactcaaataaaacttagtaagttaaacaataagttaagttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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